Protein–RNA interactions for Protein: P06028

GYPB, Glycophorin-B, humanhuman

Predictions only

Length 91 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GYPBP06028 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
GYPBP06028 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC18.21■□□□□ 0.51
GYPBP06028 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
GYPBP06028 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
GYPBP06028 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC18.21■□□□□ 0.51
GYPBP06028 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
GYPBP06028 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
GYPBP06028 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC18.21■□□□□ 0.51
GYPBP06028 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC18.21■□□□□ 0.51
GYPBP06028 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
GYPBP06028 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC18.21■□□□□ 0.51
GYPBP06028 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC18.21■□□□□ 0.51
GYPBP06028 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
GYPBP06028 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
GYPBP06028 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
GYPBP06028 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
GYPBP06028 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC18.21■□□□□ 0.5
GYPBP06028 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
GYPBP06028 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
GYPBP06028 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
GYPBP06028 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
GYPBP06028 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC18.2■□□□□ 0.5
GYPBP06028 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
GYPBP06028 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC18.2■□□□□ 0.5
GYPBP06028 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
GYPBP06028 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC18.2■□□□□ 0.5
GYPBP06028 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC18.2■□□□□ 0.5
GYPBP06028 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC18.2■□□□□ 0.5
GYPBP06028 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
GYPBP06028 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC18.2■□□□□ 0.5
GYPBP06028 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC18.2■□□□□ 0.5
GYPBP06028 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
GYPBP06028 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC18.2■□□□□ 0.5
GYPBP06028 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
GYPBP06028 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC18.2■□□□□ 0.5
GYPBP06028 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
GYPBP06028 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC18.19■□□□□ 0.5
GYPBP06028 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
GYPBP06028 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC18.19■□□□□ 0.5
GYPBP06028 JTB-203ENST00000368589 1216 ntTSL 2 BASIC18.19■□□□□ 0.5
GYPBP06028 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC18.19■□□□□ 0.5
GYPBP06028 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
GYPBP06028 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
GYPBP06028 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
GYPBP06028 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
GYPBP06028 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
GYPBP06028 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
GYPBP06028 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
GYPBP06028 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
GYPBP06028 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC18.19■□□□□ 0.5
GYPBP06028 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
GYPBP06028 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
GYPBP06028 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
GYPBP06028 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC18.19■□□□□ 0.5
GYPBP06028 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
GYPBP06028 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
GYPBP06028 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
GYPBP06028 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC18.19■□□□□ 0.5
GYPBP06028 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
GYPBP06028 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC18.18■□□□□ 0.5
GYPBP06028 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
GYPBP06028 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC18.18■□□□□ 0.5
GYPBP06028 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
GYPBP06028 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
GYPBP06028 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
GYPBP06028 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
GYPBP06028 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
GYPBP06028 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC18.18■□□□□ 0.5
GYPBP06028 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
GYPBP06028 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
GYPBP06028 AK1-201ENST00000223836 736 ntTSL 3 BASIC18.18■□□□□ 0.5
GYPBP06028 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC18.18■□□□□ 0.5
GYPBP06028 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC18.18■□□□□ 0.5
GYPBP06028 FGF8-207ENST00000618991 856 ntTSL 3 BASIC18.18■□□□□ 0.5
GYPBP06028 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
GYPBP06028 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
GYPBP06028 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
GYPBP06028 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
GYPBP06028 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
GYPBP06028 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
GYPBP06028 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
GYPBP06028 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
GYPBP06028 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
GYPBP06028 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
GYPBP06028 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC18.17■□□□□ 0.5
GYPBP06028 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
GYPBP06028 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
GYPBP06028 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
GYPBP06028 COX20-201ENST00000366528 568 ntTSL 2 BASIC18.17■□□□□ 0.5
GYPBP06028 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
GYPBP06028 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
GYPBP06028 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC18.17■□□□□ 0.5
GYPBP06028 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
GYPBP06028 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC18.17■□□□□ 0.5
GYPBP06028 TESC-206ENST00000541210 936 ntTSL 3 BASIC18.17■□□□□ 0.5
GYPBP06028 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC18.17■□□□□ 0.5
GYPBP06028 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC18.17■□□□□ 0.5
GYPBP06028 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
GYPBP06028 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
GYPBP06028 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms