Protein–RNA interactions for Protein: P00395

MT-CO1, Cytochrome c oxidase subunit 1, humanhuman

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-CO1P00395 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC20.81■□□□□ 0.92
MT-CO1P00395 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
MT-CO1P00395 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC20.81■□□□□ 0.92
MT-CO1P00395 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
MT-CO1P00395 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC20.81■□□□□ 0.92
MT-CO1P00395 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
MT-CO1P00395 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
MT-CO1P00395 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
MT-CO1P00395 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC20.8■□□□□ 0.92
MT-CO1P00395 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
MT-CO1P00395 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC20.8■□□□□ 0.92
MT-CO1P00395 AC027702.1-201ENST00000563810 1770 ntBASIC20.8■□□□□ 0.92
MT-CO1P00395 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
MT-CO1P00395 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC20.8■□□□□ 0.92
MT-CO1P00395 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
MT-CO1P00395 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC20.8■□□□□ 0.92
MT-CO1P00395 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
MT-CO1P00395 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
MT-CO1P00395 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC20.8■□□□□ 0.92
MT-CO1P00395 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC20.8■□□□□ 0.92
MT-CO1P00395 MIR4651-201ENST00000582622 73 ntBASIC20.8■□□□□ 0.92
MT-CO1P00395 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
MT-CO1P00395 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
MT-CO1P00395 AC105020.6-201ENST00000621523 1217 ntBASIC20.8■□□□□ 0.92
MT-CO1P00395 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
MT-CO1P00395 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
MT-CO1P00395 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
MT-CO1P00395 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
MT-CO1P00395 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC20.79■□□□□ 0.92
MT-CO1P00395 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC20.79■□□□□ 0.92
MT-CO1P00395 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC20.79■□□□□ 0.92
MT-CO1P00395 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC20.79■□□□□ 0.92
MT-CO1P00395 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
MT-CO1P00395 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
MT-CO1P00395 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
MT-CO1P00395 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC20.79■□□□□ 0.92
MT-CO1P00395 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
MT-CO1P00395 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC20.79■□□□□ 0.92
MT-CO1P00395 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
MT-CO1P00395 RNA5SP413-201ENST00000516373 109 ntBASIC20.79■□□□□ 0.92
MT-CO1P00395 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC20.79■□□□□ 0.92
MT-CO1P00395 TBCB-214ENST00000629269 413 ntTSL 5 BASIC20.79■□□□□ 0.92
MT-CO1P00395 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
MT-CO1P00395 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
MT-CO1P00395 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
MT-CO1P00395 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
MT-CO1P00395 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
MT-CO1P00395 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
MT-CO1P00395 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
MT-CO1P00395 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
MT-CO1P00395 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
MT-CO1P00395 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
MT-CO1P00395 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
MT-CO1P00395 TSPY20P-201ENST00000450910 630 ntBASIC20.78■□□□□ 0.92
MT-CO1P00395 NME6-213ENST00000451657 871 ntTSL 2 BASIC20.78■□□□□ 0.92
MT-CO1P00395 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC20.78■□□□□ 0.92
MT-CO1P00395 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC20.78■□□□□ 0.92
MT-CO1P00395 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC20.78■□□□□ 0.92
MT-CO1P00395 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC20.78■□□□□ 0.92
MT-CO1P00395 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
MT-CO1P00395 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC20.78■□□□□ 0.92
MT-CO1P00395 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
MT-CO1P00395 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
MT-CO1P00395 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
MT-CO1P00395 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC20.78■□□□□ 0.92
MT-CO1P00395 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
MT-CO1P00395 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
MT-CO1P00395 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC20.77■□□□□ 0.92
MT-CO1P00395 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
MT-CO1P00395 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC20.77■□□□□ 0.92
MT-CO1P00395 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.92
MT-CO1P00395 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC20.77■□□□□ 0.92
MT-CO1P00395 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
MT-CO1P00395 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
MT-CO1P00395 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
MT-CO1P00395 GATS-209ENST00000454084 1030 ntTSL 3 BASIC20.77■□□□□ 0.92
MT-CO1P00395 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
MT-CO1P00395 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC20.77■□□□□ 0.92
MT-CO1P00395 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC20.77■□□□□ 0.92
MT-CO1P00395 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
MT-CO1P00395 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
MT-CO1P00395 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
MT-CO1P00395 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
MT-CO1P00395 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
MT-CO1P00395 ERF-202ENST00000440177 2032 ntTSL 2 BASIC20.77■□□□□ 0.91
MT-CO1P00395 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
MT-CO1P00395 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
MT-CO1P00395 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
MT-CO1P00395 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC20.76■□□□□ 0.91
MT-CO1P00395 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC20.76■□□□□ 0.91
MT-CO1P00395 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
MT-CO1P00395 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
MT-CO1P00395 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
MT-CO1P00395 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC20.76■□□□□ 0.91
MT-CO1P00395 AL356652.1-201ENST00000615962 565 ntBASIC20.76■□□□□ 0.91
MT-CO1P00395 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
MT-CO1P00395 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC20.76■□□□□ 0.91
MT-CO1P00395 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
MT-CO1P00395 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
MT-CO1P00395 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms