Protein–RNA interactions for Protein: O75382

TRIM3, Tripartite motif-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3O75382 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC18.88■□□□□ 0.61
TRIM3O75382 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC18.88■□□□□ 0.61
TRIM3O75382 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC18.88■□□□□ 0.61
TRIM3O75382 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRIM3O75382 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC18.88■□□□□ 0.61
TRIM3O75382 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRIM3O75382 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRIM3O75382 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
TRIM3O75382 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC18.88■□□□□ 0.61
TRIM3O75382 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC18.88■□□□□ 0.61
TRIM3O75382 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRIM3O75382 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRIM3O75382 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRIM3O75382 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC18.88■□□□□ 0.61
TRIM3O75382 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRIM3O75382 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
TRIM3O75382 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
TRIM3O75382 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
TRIM3O75382 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
TRIM3O75382 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TRIM3O75382 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC18.87■□□□□ 0.61
TRIM3O75382 SAPCD2P1-201ENST00000395413 1184 ntBASIC18.87■□□□□ 0.61
TRIM3O75382 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
TRIM3O75382 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TRIM3O75382 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC18.87■□□□□ 0.61
TRIM3O75382 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
TRIM3O75382 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC18.87■□□□□ 0.61
TRIM3O75382 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
TRIM3O75382 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TRIM3O75382 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC18.87■□□□□ 0.61
TRIM3O75382 MKRN4P-201ENST00000444706 1521 ntBASIC18.87■□□□□ 0.61
TRIM3O75382 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC18.87■□□□□ 0.61
TRIM3O75382 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
TRIM3O75382 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC18.87■□□□□ 0.61
TRIM3O75382 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC18.87■□□□□ 0.61
TRIM3O75382 PFKL-212ENST00000628044 129 ntTSL 3 BASIC18.87■□□□□ 0.61
TRIM3O75382 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
TRIM3O75382 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TRIM3O75382 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TRIM3O75382 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRIM3O75382 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TRIM3O75382 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRIM3O75382 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRIM3O75382 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRIM3O75382 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRIM3O75382 AF106564.1-201ENST00000607058 2553 ntBASIC18.86■□□□□ 0.61
TRIM3O75382 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TRIM3O75382 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
TRIM3O75382 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
TRIM3O75382 AL138781.1-201ENST00000566567 1274 ntBASIC18.86■□□□□ 0.61
TRIM3O75382 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
TRIM3O75382 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
TRIM3O75382 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRIM3O75382 AL391422.3-201ENST00000603791 2761 ntBASIC18.86■□□□□ 0.61
TRIM3O75382 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRIM3O75382 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
TRIM3O75382 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC18.85■□□□□ 0.61
TRIM3O75382 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC18.85■□□□□ 0.61
TRIM3O75382 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
TRIM3O75382 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRIM3O75382 AC010980.2-201ENST00000587099 1412 ntBASIC18.85■□□□□ 0.61
TRIM3O75382 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRIM3O75382 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRIM3O75382 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
TRIM3O75382 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC18.85■□□□□ 0.61
TRIM3O75382 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRIM3O75382 AC007322.3-201ENST00000426526 701 ntBASIC18.85■□□□□ 0.61
TRIM3O75382 DENND3-207ENST00000518347 850 ntTSL 2 BASIC18.85■□□□□ 0.61
TRIM3O75382 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC18.85■□□□□ 0.61
TRIM3O75382 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC18.85■□□□□ 0.61
TRIM3O75382 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC18.85■□□□□ 0.61
TRIM3O75382 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRIM3O75382 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC18.85■□□□□ 0.61
TRIM3O75382 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRIM3O75382 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRIM3O75382 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC18.85■□□□□ 0.61
TRIM3O75382 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC18.85■□□□□ 0.61
TRIM3O75382 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
TRIM3O75382 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRIM3O75382 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRIM3O75382 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRIM3O75382 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRIM3O75382 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC18.84■□□□□ 0.61
TRIM3O75382 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC18.84■□□□□ 0.61
TRIM3O75382 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
TRIM3O75382 MIPEPP3-201ENST00000412105 444 ntBASIC18.84■□□□□ 0.61
TRIM3O75382 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
TRIM3O75382 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC18.84■□□□□ 0.61
TRIM3O75382 PHB2-213ENST00000546111 858 ntTSL 2 BASIC18.84■□□□□ 0.61
TRIM3O75382 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC18.84■□□□□ 0.61
TRIM3O75382 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC18.84■□□□□ 0.61
TRIM3O75382 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC18.84■□□□□ 0.61
TRIM3O75382 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC18.84■□□□□ 0.61
TRIM3O75382 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRIM3O75382 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
TRIM3O75382 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRIM3O75382 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC18.84■□□□□ 0.61
TRIM3O75382 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
TRIM3O75382 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
TRIM3O75382 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms