Protein–RNA interactions for Protein: O43900

PRICKLE3, Prickle planar cell polarity protein 3, humanhuman

Predicted RBP Predictions only

Length 615 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE3O43900 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PRICKLE3O43900 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC19.52■□□□□ 0.72
PRICKLE3O43900 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
PRICKLE3O43900 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
PRICKLE3O43900 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC19.52■□□□□ 0.72
PRICKLE3O43900 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC19.52■□□□□ 0.72
PRICKLE3O43900 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
PRICKLE3O43900 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
PRICKLE3O43900 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
PRICKLE3O43900 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
PRICKLE3O43900 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC19.52■□□□□ 0.72
PRICKLE3O43900 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
PRICKLE3O43900 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC19.52■□□□□ 0.72
PRICKLE3O43900 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC19.52■□□□□ 0.72
PRICKLE3O43900 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
PRICKLE3O43900 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC19.52■□□□□ 0.72
PRICKLE3O43900 GATS-209ENST00000454084 1030 ntTSL 3 BASIC19.52■□□□□ 0.72
PRICKLE3O43900 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC19.52■□□□□ 0.72
PRICKLE3O43900 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
PRICKLE3O43900 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC19.52■□□□□ 0.72
PRICKLE3O43900 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC19.52■□□□□ 0.72
PRICKLE3O43900 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
PRICKLE3O43900 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
PRICKLE3O43900 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.71
PRICKLE3O43900 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.71
PRICKLE3O43900 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.71
PRICKLE3O43900 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC19.52■□□□□ 0.71
PRICKLE3O43900 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
PRICKLE3O43900 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
PRICKLE3O43900 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
PRICKLE3O43900 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
PRICKLE3O43900 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PRICKLE3O43900 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC19.51■□□□□ 0.71
PRICKLE3O43900 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
PRICKLE3O43900 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
PRICKLE3O43900 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC19.51■□□□□ 0.71
PRICKLE3O43900 KRT18P6-201ENST00000555540 1265 ntBASIC19.51■□□□□ 0.71
PRICKLE3O43900 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
PRICKLE3O43900 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC19.51■□□□□ 0.71
PRICKLE3O43900 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
PRICKLE3O43900 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
PRICKLE3O43900 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PRICKLE3O43900 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PRICKLE3O43900 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PRICKLE3O43900 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC19.51■□□□□ 0.71
PRICKLE3O43900 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC19.51■□□□□ 0.71
PRICKLE3O43900 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC19.51■□□□□ 0.71
PRICKLE3O43900 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC19.51■□□□□ 0.71
PRICKLE3O43900 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
PRICKLE3O43900 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC19.51■□□□□ 0.71
PRICKLE3O43900 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PRICKLE3O43900 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
PRICKLE3O43900 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC19.5■□□□□ 0.71
PRICKLE3O43900 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC19.5■□□□□ 0.71
PRICKLE3O43900 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
PRICKLE3O43900 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC19.5■□□□□ 0.71
PRICKLE3O43900 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
PRICKLE3O43900 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
PRICKLE3O43900 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PRICKLE3O43900 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PRICKLE3O43900 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PRICKLE3O43900 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PRICKLE3O43900 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PRICKLE3O43900 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
PRICKLE3O43900 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC19.49■□□□□ 0.71
PRICKLE3O43900 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
PRICKLE3O43900 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
PRICKLE3O43900 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PRICKLE3O43900 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
PRICKLE3O43900 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PRICKLE3O43900 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PRICKLE3O43900 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PRICKLE3O43900 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
PRICKLE3O43900 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC19.49■□□□□ 0.71
PRICKLE3O43900 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC19.49■□□□□ 0.71
PRICKLE3O43900 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC19.49■□□□□ 0.71
PRICKLE3O43900 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC19.49■□□□□ 0.71
PRICKLE3O43900 USP48-205ENST00000421625 2818 ntTSL 2 BASIC19.49■□□□□ 0.71
PRICKLE3O43900 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PRICKLE3O43900 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PRICKLE3O43900 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PRICKLE3O43900 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
PRICKLE3O43900 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PRICKLE3O43900 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
PRICKLE3O43900 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
PRICKLE3O43900 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
PRICKLE3O43900 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PRICKLE3O43900 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
PRICKLE3O43900 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PRICKLE3O43900 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC19.48■□□□□ 0.71
PRICKLE3O43900 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
PRICKLE3O43900 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
PRICKLE3O43900 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
PRICKLE3O43900 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC19.48■□□□□ 0.71
PRICKLE3O43900 HLA-B-256ENST00000639848 1089 ntBASIC19.48■□□□□ 0.71
PRICKLE3O43900 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC19.48■□□□□ 0.71
PRICKLE3O43900 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PRICKLE3O43900 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC19.48■□□□□ 0.71
PRICKLE3O43900 AC092720.2-201ENST00000602388 1665 ntBASIC19.48■□□□□ 0.71
PRICKLE3O43900 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms