Protein–RNA interactions for Protein: O14646

CHD1, Chromodomain-helicase-DNA-binding protein 1, humanhuman

Predictions only

Length 1,710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1O14646 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC33.36■■■□□ 2.93
CHD1O14646 PREB-202ENST00000406567 1910 ntTSL 5 BASIC33.36■■■□□ 2.93
CHD1O14646 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC33.36■■■□□ 2.93
CHD1O14646 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC33.36■■■□□ 2.93
CHD1O14646 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC33.36■■■□□ 2.93
CHD1O14646 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC33.36■■■□□ 2.93
CHD1O14646 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC33.36■■■□□ 2.93
CHD1O14646 SAPCD2P2-201ENST00000431719 1174 ntBASIC33.36■■■□□ 2.93
CHD1O14646 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC33.36■■■□□ 2.93
CHD1O14646 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC33.36■■■□□ 2.93
CHD1O14646 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC33.36■■■□□ 2.93
CHD1O14646 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC33.35■■■□□ 2.93
CHD1O14646 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC33.35■■■□□ 2.93
CHD1O14646 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC33.35■■■□□ 2.93
CHD1O14646 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC33.35■■■□□ 2.93
CHD1O14646 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC33.35■■■□□ 2.93
CHD1O14646 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC33.35■■■□□ 2.93
CHD1O14646 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC33.35■■■□□ 2.93
CHD1O14646 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC33.35■■■□□ 2.93
CHD1O14646 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC33.34■■■□□ 2.93
CHD1O14646 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC33.34■■■□□ 2.93
CHD1O14646 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC33.34■■■□□ 2.93
CHD1O14646 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC33.34■■■□□ 2.93
CHD1O14646 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC33.34■■■□□ 2.93
CHD1O14646 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC33.34■■■□□ 2.93
CHD1O14646 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC33.34■■■□□ 2.93
CHD1O14646 IPPK-202ENST00000375522 882 ntTSL 3 BASIC33.33■■■□□ 2.93
CHD1O14646 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC33.33■■■□□ 2.93
CHD1O14646 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC33.33■■■□□ 2.93
CHD1O14646 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC33.33■■■□□ 2.93
CHD1O14646 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC33.33■■■□□ 2.93
CHD1O14646 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC33.33■■■□□ 2.93
CHD1O14646 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC33.33■■■□□ 2.93
CHD1O14646 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC33.33■■■□□ 2.93
CHD1O14646 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC33.33■■■□□ 2.93
CHD1O14646 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC33.33■■■□□ 2.93
CHD1O14646 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC33.33■■■□□ 2.93
CHD1O14646 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC33.33■■■□□ 2.93
CHD1O14646 DBP-204ENST00000599385 709 ntTSL 3 BASIC33.33■■■□□ 2.93
CHD1O14646 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC33.33■■■□□ 2.93
CHD1O14646 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC33.33■■■□□ 2.93
CHD1O14646 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC33.32■■■□□ 2.93
CHD1O14646 AC010542.4-201ENST00000563151 1910 ntBASIC33.32■■■□□ 2.93
CHD1O14646 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC33.32■■■□□ 2.93
CHD1O14646 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC33.32■■■□□ 2.93
CHD1O14646 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC33.32■■■□□ 2.92
CHD1O14646 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC33.32■■■□□ 2.92
CHD1O14646 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC33.32■■■□□ 2.92
CHD1O14646 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC33.32■■■□□ 2.92
CHD1O14646 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC33.31■■■□□ 2.92
CHD1O14646 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC33.31■■■□□ 2.92
CHD1O14646 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC33.31■■■□□ 2.92
CHD1O14646 GCA-201ENST00000233612 1694 ntTSL 2 BASIC33.31■■■□□ 2.92
CHD1O14646 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC33.31■■■□□ 2.92
CHD1O14646 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC33.31■■■□□ 2.92
CHD1O14646 PP7080-204ENST00000510714 601 ntTSL 3 BASIC33.31■■■□□ 2.92
CHD1O14646 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC33.31■■■□□ 2.92
CHD1O14646 AC093458.2-201ENST00000623150 629 ntBASIC33.31■■■□□ 2.92
CHD1O14646 CR392000.1-201ENST00000624770 1228 ntBASIC33.31■■■□□ 2.92
CHD1O14646 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC33.31■■■□□ 2.92
CHD1O14646 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC33.31■■■□□ 2.92
CHD1O14646 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC33.31■■■□□ 2.92
CHD1O14646 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC33.31■■■□□ 2.92
CHD1O14646 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC33.31■■■□□ 2.92
CHD1O14646 MESTP1-201ENST00000404287 994 ntBASIC33.31■■■□□ 2.92
CHD1O14646 HCG4P8-203ENST00000443049 980 ntBASIC33.31■■■□□ 2.92
CHD1O14646 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC33.31■■■□□ 2.92
CHD1O14646 AC004264.1-201ENST00000608354 794 ntBASIC33.31■■■□□ 2.92
CHD1O14646 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC33.3■■■□□ 2.92
CHD1O14646 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC33.3■■■□□ 2.92
CHD1O14646 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC33.3■■■□□ 2.92
CHD1O14646 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC33.3■■■□□ 2.92
CHD1O14646 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC33.3■■■□□ 2.92
CHD1O14646 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC33.3■■■□□ 2.92
CHD1O14646 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC33.3■■■□□ 2.92
CHD1O14646 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC33.3■■■□□ 2.92
CHD1O14646 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC33.3■■■□□ 2.92
CHD1O14646 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC33.3■■■□□ 2.92
CHD1O14646 CLN6-204ENST00000564752 900 ntTSL 3 BASIC33.3■■■□□ 2.92
CHD1O14646 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC33.3■■■□□ 2.92
CHD1O14646 CLN6-214ENST00000636314 442 ntTSL 3 BASIC33.3■■■□□ 2.92
CHD1O14646 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC33.3■■■□□ 2.92
CHD1O14646 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC33.3■■■□□ 2.92
CHD1O14646 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC33.29■■■□□ 2.92
CHD1O14646 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC33.29■■■□□ 2.92
CHD1O14646 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC33.29■■■□□ 2.92
CHD1O14646 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC33.29■■■□□ 2.92
CHD1O14646 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC33.29■■■□□ 2.92
CHD1O14646 PNN-205ENST00000556530 601 ntTSL 2 BASIC33.29■■■□□ 2.92
CHD1O14646 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC33.29■■■□□ 2.92
CHD1O14646 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC33.29■■■□□ 2.92
CHD1O14646 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC33.29■■■□□ 2.92
CHD1O14646 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC33.28■■■□□ 2.92
CHD1O14646 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC33.28■■■□□ 2.92
CHD1O14646 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC33.28■■■□□ 2.92
CHD1O14646 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC33.28■■■□□ 2.92
CHD1O14646 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC33.28■■■□□ 2.92
CHD1O14646 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC33.28■■■□□ 2.92
CHD1O14646 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC33.28■■■□□ 2.92
CHD1O14646 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC33.28■■■□□ 2.92
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms