Protein–RNA interactions for Protein: O00526

UPK2, Uroplakin-2, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK2O00526 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC16.3■□□□□ 0.2
UPK2O00526 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC16.3■□□□□ 0.2
UPK2O00526 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
UPK2O00526 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
UPK2O00526 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
UPK2O00526 TCF3P1-201ENST00000423021 1937 ntBASIC16.29■□□□□ 0.2
UPK2O00526 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC16.29■□□□□ 0.2
UPK2O00526 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
UPK2O00526 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
UPK2O00526 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC16.29■□□□□ 0.2
UPK2O00526 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
UPK2O00526 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
UPK2O00526 SMG8-203ENST00000578922 2178 ntBASIC16.29■□□□□ 0.2
UPK2O00526 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC16.29■□□□□ 0.2
UPK2O00526 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
UPK2O00526 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
UPK2O00526 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
UPK2O00526 ZNRF2P3-201ENST00000424200 374 ntBASIC16.29■□□□□ 0.2
UPK2O00526 CDV3P1-201ENST00000471403 739 ntBASIC16.29■□□□□ 0.2
UPK2O00526 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
UPK2O00526 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
UPK2O00526 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
UPK2O00526 FAM21FP-204ENST00000608637 956 ntBASIC16.29■□□□□ 0.2
UPK2O00526 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
UPK2O00526 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
UPK2O00526 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
UPK2O00526 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
UPK2O00526 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
UPK2O00526 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC16.29■□□□□ 0.2
UPK2O00526 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
UPK2O00526 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
UPK2O00526 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC16.29■□□□□ 0.2
UPK2O00526 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
UPK2O00526 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
UPK2O00526 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
UPK2O00526 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
UPK2O00526 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
UPK2O00526 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
UPK2O00526 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
UPK2O00526 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
UPK2O00526 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
UPK2O00526 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
UPK2O00526 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
UPK2O00526 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
UPK2O00526 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
UPK2O00526 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC16.28■□□□□ 0.2
UPK2O00526 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
UPK2O00526 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
UPK2O00526 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
UPK2O00526 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
UPK2O00526 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
UPK2O00526 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
UPK2O00526 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC16.27■□□□□ 0.2
UPK2O00526 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC16.27■□□□□ 0.2
UPK2O00526 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
UPK2O00526 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC16.27■□□□□ 0.2
UPK2O00526 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
UPK2O00526 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC16.27■□□□□ 0.2
UPK2O00526 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
UPK2O00526 BID-204ENST00000399767 2129 ntTSL 2 BASIC16.27■□□□□ 0.2
UPK2O00526 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
UPK2O00526 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
UPK2O00526 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
UPK2O00526 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC16.27■□□□□ 0.2
UPK2O00526 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC16.27■□□□□ 0.2
UPK2O00526 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
UPK2O00526 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
UPK2O00526 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
UPK2O00526 LGR4-203ENST00000480977 492 ntTSL 2 BASIC16.27■□□□□ 0.2
UPK2O00526 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC16.27■□□□□ 0.2
UPK2O00526 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
UPK2O00526 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
UPK2O00526 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC16.27■□□□□ 0.19
UPK2O00526 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
UPK2O00526 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
UPK2O00526 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
UPK2O00526 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC16.27■□□□□ 0.19
UPK2O00526 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC16.27■□□□□ 0.19
UPK2O00526 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
UPK2O00526 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
UPK2O00526 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC16.27■□□□□ 0.19
UPK2O00526 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
UPK2O00526 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.19
UPK2O00526 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
UPK2O00526 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
UPK2O00526 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC16.26■□□□□ 0.19
UPK2O00526 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
UPK2O00526 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC16.26■□□□□ 0.19
UPK2O00526 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
UPK2O00526 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
UPK2O00526 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
UPK2O00526 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
UPK2O00526 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC16.26■□□□□ 0.19
UPK2O00526 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
UPK2O00526 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
UPK2O00526 UBE2DNL-204ENST00000602536 740 ntBASIC16.26■□□□□ 0.19
UPK2O00526 TFG-210ENST00000620299 1289 ntTSL 5 BASIC16.26■□□□□ 0.19
UPK2O00526 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
UPK2O00526 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
UPK2O00526 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms