Protein–RNA interactions for Protein: D6REC4

CFAP99, Cilia- and flagella-associated protein 99, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP99D6REC4 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
CFAP99D6REC4 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CFAP99D6REC4 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CFAP99D6REC4 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CFAP99D6REC4 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CFAP99D6REC4 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
CFAP99D6REC4 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC20.22■□□□□ 0.83
CFAP99D6REC4 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC20.22■□□□□ 0.83
CFAP99D6REC4 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CFAP99D6REC4 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC20.22■□□□□ 0.83
CFAP99D6REC4 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
CFAP99D6REC4 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CFAP99D6REC4 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
CFAP99D6REC4 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CFAP99D6REC4 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC20.22■□□□□ 0.83
CFAP99D6REC4 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC20.22■□□□□ 0.83
CFAP99D6REC4 MIR2861-201ENST00000636310 90 ntBASIC20.22■□□□□ 0.83
CFAP99D6REC4 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC20.22■□□□□ 0.83
CFAP99D6REC4 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC20.22■□□□□ 0.83
CFAP99D6REC4 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC20.22■□□□□ 0.83
CFAP99D6REC4 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CFAP99D6REC4 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
CFAP99D6REC4 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
CFAP99D6REC4 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
CFAP99D6REC4 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
CFAP99D6REC4 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CFAP99D6REC4 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC20.21■□□□□ 0.83
CFAP99D6REC4 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
CFAP99D6REC4 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
CFAP99D6REC4 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC20.21■□□□□ 0.83
CFAP99D6REC4 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC20.21■□□□□ 0.83
CFAP99D6REC4 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CFAP99D6REC4 AC087633.2-202ENST00000565166 1439 ntBASIC20.21■□□□□ 0.83
CFAP99D6REC4 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
CFAP99D6REC4 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CFAP99D6REC4 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
CFAP99D6REC4 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CFAP99D6REC4 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC20.21■□□□□ 0.83
CFAP99D6REC4 TK2-208ENST00000545043 1120 ntTSL 2 BASIC20.21■□□□□ 0.83
CFAP99D6REC4 OAS3-207ENST00000551007 998 ntTSL 2 BASIC20.21■□□□□ 0.83
CFAP99D6REC4 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC20.21■□□□□ 0.83
CFAP99D6REC4 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
CFAP99D6REC4 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CFAP99D6REC4 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CFAP99D6REC4 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC20.21■□□□□ 0.83
CFAP99D6REC4 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
CFAP99D6REC4 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC20.21■□□□□ 0.83
CFAP99D6REC4 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CFAP99D6REC4 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
CFAP99D6REC4 AC007225.1-201ENST00000566331 1836 ntBASIC20.2■□□□□ 0.82
CFAP99D6REC4 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC20.2■□□□□ 0.82
CFAP99D6REC4 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
CFAP99D6REC4 AC010980.2-201ENST00000587099 1412 ntBASIC20.2■□□□□ 0.82
CFAP99D6REC4 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
CFAP99D6REC4 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CFAP99D6REC4 FP700111.2-201ENST00000619190 1892 ntBASIC20.2■□□□□ 0.82
CFAP99D6REC4 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
CFAP99D6REC4 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CFAP99D6REC4 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
CFAP99D6REC4 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
CFAP99D6REC4 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC20.2■□□□□ 0.82
CFAP99D6REC4 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC20.2■□□□□ 0.82
CFAP99D6REC4 MKRN4P-201ENST00000444706 1521 ntBASIC20.2■□□□□ 0.82
CFAP99D6REC4 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CFAP99D6REC4 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC20.2■□□□□ 0.82
CFAP99D6REC4 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC20.19■□□□□ 0.82
CFAP99D6REC4 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CFAP99D6REC4 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CFAP99D6REC4 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CFAP99D6REC4 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CFAP99D6REC4 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC20.19■□□□□ 0.82
CFAP99D6REC4 GPX1P1-201ENST00000388829 606 ntBASIC20.19■□□□□ 0.82
CFAP99D6REC4 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC20.19■□□□□ 0.82
CFAP99D6REC4 AC093787.1-201ENST00000450396 207 ntBASIC20.19■□□□□ 0.82
CFAP99D6REC4 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC20.19■□□□□ 0.82
CFAP99D6REC4 AC083906.2-201ENST00000511578 360 ntBASIC20.19■□□□□ 0.82
CFAP99D6REC4 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC20.19■□□□□ 0.82
CFAP99D6REC4 ISCU-212ENST00000547005 795 ntTSL 3 BASIC20.19■□□□□ 0.82
CFAP99D6REC4 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC20.19■□□□□ 0.82
CFAP99D6REC4 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CFAP99D6REC4 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC20.19■□□□□ 0.82
CFAP99D6REC4 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC20.19■□□□□ 0.82
CFAP99D6REC4 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC20.19■□□□□ 0.82
CFAP99D6REC4 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CFAP99D6REC4 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
CFAP99D6REC4 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CFAP99D6REC4 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC20.19■□□□□ 0.82
CFAP99D6REC4 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CFAP99D6REC4 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CFAP99D6REC4 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CFAP99D6REC4 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CFAP99D6REC4 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CFAP99D6REC4 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CFAP99D6REC4 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC20.19■□□□□ 0.82
CFAP99D6REC4 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CFAP99D6REC4 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CFAP99D6REC4 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CFAP99D6REC4 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
CFAP99D6REC4 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC20.18■□□□□ 0.82
CFAP99D6REC4 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms