Protein–RNA interactions for Protein: A6NKQ9

CGB1, Choriogonadotropin subunit beta variant 1, humanhuman

Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CGB1A6NKQ9 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC16.24■□□□□ 0.19
CGB1A6NKQ9 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CGB1A6NKQ9 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CGB1A6NKQ9 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CGB1A6NKQ9 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
CGB1A6NKQ9 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC16.24■□□□□ 0.19
CGB1A6NKQ9 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
CGB1A6NKQ9 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC16.24■□□□□ 0.19
CGB1A6NKQ9 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CGB1A6NKQ9 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CGB1A6NKQ9 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
CGB1A6NKQ9 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CGB1A6NKQ9 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC16.24■□□□□ 0.19
CGB1A6NKQ9 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
CGB1A6NKQ9 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CGB1A6NKQ9 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC16.23■□□□□ 0.19
CGB1A6NKQ9 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
CGB1A6NKQ9 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CGB1A6NKQ9 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CGB1A6NKQ9 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
CGB1A6NKQ9 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CGB1A6NKQ9 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CGB1A6NKQ9 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC16.23■□□□□ 0.19
CGB1A6NKQ9 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
CGB1A6NKQ9 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC16.23■□□□□ 0.19
CGB1A6NKQ9 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC16.23■□□□□ 0.19
CGB1A6NKQ9 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC16.23■□□□□ 0.19
CGB1A6NKQ9 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
CGB1A6NKQ9 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC16.23■□□□□ 0.19
CGB1A6NKQ9 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CGB1A6NKQ9 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC16.23■□□□□ 0.19
CGB1A6NKQ9 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC16.23■□□□□ 0.19
CGB1A6NKQ9 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CGB1A6NKQ9 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CGB1A6NKQ9 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CGB1A6NKQ9 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC16.23■□□□□ 0.19
CGB1A6NKQ9 PCDHAC2-203ENST00000615316 3011 ntBASIC16.23■□□□□ 0.19
CGB1A6NKQ9 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CGB1A6NKQ9 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC16.22■□□□□ 0.19
CGB1A6NKQ9 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC16.22■□□□□ 0.19
CGB1A6NKQ9 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC16.22■□□□□ 0.19
CGB1A6NKQ9 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC16.22■□□□□ 0.19
CGB1A6NKQ9 ME2-218ENST00000640965 2476 ntTSL 5 BASIC16.22■□□□□ 0.19
CGB1A6NKQ9 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
CGB1A6NKQ9 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CGB1A6NKQ9 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
CGB1A6NKQ9 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CGB1A6NKQ9 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC16.22■□□□□ 0.19
CGB1A6NKQ9 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
CGB1A6NKQ9 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CGB1A6NKQ9 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC16.22■□□□□ 0.19
CGB1A6NKQ9 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CGB1A6NKQ9 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC16.22■□□□□ 0.19
CGB1A6NKQ9 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
CGB1A6NKQ9 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CGB1A6NKQ9 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CGB1A6NKQ9 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CGB1A6NKQ9 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC16.22■□□□□ 0.19
CGB1A6NKQ9 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CGB1A6NKQ9 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
CGB1A6NKQ9 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
CGB1A6NKQ9 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CGB1A6NKQ9 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
CGB1A6NKQ9 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC16.22■□□□□ 0.19
CGB1A6NKQ9 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC16.22■□□□□ 0.19
CGB1A6NKQ9 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CGB1A6NKQ9 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CGB1A6NKQ9 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
CGB1A6NKQ9 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CGB1A6NKQ9 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CGB1A6NKQ9 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
CGB1A6NKQ9 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
CGB1A6NKQ9 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CGB1A6NKQ9 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC16.21■□□□□ 0.19
CGB1A6NKQ9 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC16.21■□□□□ 0.19
CGB1A6NKQ9 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CGB1A6NKQ9 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CGB1A6NKQ9 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
CGB1A6NKQ9 AC097381.1-201ENST00000429019 1296 ntBASIC16.21■□□□□ 0.19
CGB1A6NKQ9 CD44-222ENST00000526025 1052 ntTSL 2 BASIC16.21■□□□□ 0.19
CGB1A6NKQ9 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
CGB1A6NKQ9 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC16.21■□□□□ 0.19
CGB1A6NKQ9 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CGB1A6NKQ9 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
CGB1A6NKQ9 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC16.21■□□□□ 0.19
CGB1A6NKQ9 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC16.21■□□□□ 0.18
CGB1A6NKQ9 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC16.21■□□□□ 0.18
CGB1A6NKQ9 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
CGB1A6NKQ9 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
CGB1A6NKQ9 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC16.21■□□□□ 0.18
CGB1A6NKQ9 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
CGB1A6NKQ9 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.18
CGB1A6NKQ9 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
CGB1A6NKQ9 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC16.2■□□□□ 0.18
CGB1A6NKQ9 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
CGB1A6NKQ9 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC16.2■□□□□ 0.18
CGB1A6NKQ9 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
CGB1A6NKQ9 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CGB1A6NKQ9 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
CGB1A6NKQ9 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms