Protein–RNA interactions for Protein: A6NKL6

TMEM200C, Transmembrane protein 200C, humanhuman

Predictions only

Length 621 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM200CA6NKL6 RNA5SP413-201ENST00000516373 109 ntBASIC18.82■□□□□ 0.6
TMEM200CA6NKL6 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC18.82■□□□□ 0.6
TMEM200CA6NKL6 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
TMEM200CA6NKL6 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TMEM200CA6NKL6 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TMEM200CA6NKL6 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
TMEM200CA6NKL6 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
TMEM200CA6NKL6 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
TMEM200CA6NKL6 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TMEM200CA6NKL6 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TMEM200CA6NKL6 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
TMEM200CA6NKL6 RNF165-205ENST00000588679 2904 ntBASIC18.81■□□□□ 0.6
TMEM200CA6NKL6 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC18.81■□□□□ 0.6
TMEM200CA6NKL6 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TMEM200CA6NKL6 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TMEM200CA6NKL6 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TMEM200CA6NKL6 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TMEM200CA6NKL6 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
TMEM200CA6NKL6 TSPY20P-201ENST00000450910 630 ntBASIC18.81■□□□□ 0.6
TMEM200CA6NKL6 C2orf69P4-201ENST00000565394 541 ntBASIC18.81■□□□□ 0.6
TMEM200CA6NKL6 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC18.81■□□□□ 0.6
TMEM200CA6NKL6 KRT8P36-201ENST00000489121 1440 ntBASIC18.81■□□□□ 0.6
TMEM200CA6NKL6 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TMEM200CA6NKL6 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TMEM200CA6NKL6 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TMEM200CA6NKL6 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC18.8■□□□□ 0.6
TMEM200CA6NKL6 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC18.8■□□□□ 0.6
TMEM200CA6NKL6 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
TMEM200CA6NKL6 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
TMEM200CA6NKL6 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC18.8■□□□□ 0.6
TMEM200CA6NKL6 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TMEM200CA6NKL6 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC18.8■□□□□ 0.6
TMEM200CA6NKL6 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
TMEM200CA6NKL6 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC18.8■□□□□ 0.6
TMEM200CA6NKL6 INO80E-214ENST00000620599 515 ntTSL 2 BASIC18.8■□□□□ 0.6
TMEM200CA6NKL6 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC18.8■□□□□ 0.6
TMEM200CA6NKL6 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TMEM200CA6NKL6 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
TMEM200CA6NKL6 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TMEM200CA6NKL6 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TMEM200CA6NKL6 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TMEM200CA6NKL6 AL121603.2-201ENST00000557373 2117 ntBASIC18.8■□□□□ 0.6
TMEM200CA6NKL6 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TMEM200CA6NKL6 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TMEM200CA6NKL6 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TMEM200CA6NKL6 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TMEM200CA6NKL6 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC18.8■□□□□ 0.6
TMEM200CA6NKL6 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TMEM200CA6NKL6 AC006128.1-201ENST00000624704 1661 ntBASIC18.79■□□□□ 0.6
TMEM200CA6NKL6 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TMEM200CA6NKL6 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TMEM200CA6NKL6 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TMEM200CA6NKL6 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TMEM200CA6NKL6 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC18.79■□□□□ 0.6
TMEM200CA6NKL6 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC18.79■□□□□ 0.6
TMEM200CA6NKL6 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC18.79■□□□□ 0.6
TMEM200CA6NKL6 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC18.79■□□□□ 0.6
TMEM200CA6NKL6 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC18.79■□□□□ 0.6
TMEM200CA6NKL6 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
TMEM200CA6NKL6 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TMEM200CA6NKL6 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC18.79■□□□□ 0.6
TMEM200CA6NKL6 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC18.79■□□□□ 0.6
TMEM200CA6NKL6 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TMEM200CA6NKL6 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TMEM200CA6NKL6 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TMEM200CA6NKL6 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
TMEM200CA6NKL6 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TMEM200CA6NKL6 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
TMEM200CA6NKL6 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC18.79■□□□□ 0.6
TMEM200CA6NKL6 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TMEM200CA6NKL6 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
TMEM200CA6NKL6 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TMEM200CA6NKL6 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC18.78■□□□□ 0.6
TMEM200CA6NKL6 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TMEM200CA6NKL6 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC18.78■□□□□ 0.6
TMEM200CA6NKL6 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
TMEM200CA6NKL6 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TMEM200CA6NKL6 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
TMEM200CA6NKL6 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TMEM200CA6NKL6 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
TMEM200CA6NKL6 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC18.78■□□□□ 0.6
TMEM200CA6NKL6 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC18.78■□□□□ 0.6
TMEM200CA6NKL6 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC18.78■□□□□ 0.6
TMEM200CA6NKL6 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC18.78■□□□□ 0.6
TMEM200CA6NKL6 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC18.78■□□□□ 0.6
TMEM200CA6NKL6 HES2-205ENST00000487437 968 ntTSL 3 BASIC18.78■□□□□ 0.6
TMEM200CA6NKL6 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC18.78■□□□□ 0.6
TMEM200CA6NKL6 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC18.78■□□□□ 0.6
TMEM200CA6NKL6 HLA-B-256ENST00000639848 1089 ntBASIC18.78■□□□□ 0.6
TMEM200CA6NKL6 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TMEM200CA6NKL6 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
TMEM200CA6NKL6 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
TMEM200CA6NKL6 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TMEM200CA6NKL6 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC18.78■□□□□ 0.6
TMEM200CA6NKL6 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC18.78■□□□□ 0.6
TMEM200CA6NKL6 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TMEM200CA6NKL6 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TMEM200CA6NKL6 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
TMEM200CA6NKL6 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC18.77■□□□□ 0.6
TMEM200CA6NKL6 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms