Protein–RNA interactions for Protein: A6NHC0

CAPN8, Calpain-8, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN8A6NHC0 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CAPN8A6NHC0 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CAPN8A6NHC0 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC20.57■□□□□ 0.88
CAPN8A6NHC0 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC20.57■□□□□ 0.88
CAPN8A6NHC0 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC20.57■□□□□ 0.88
CAPN8A6NHC0 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC20.57■□□□□ 0.88
CAPN8A6NHC0 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC20.57■□□□□ 0.88
CAPN8A6NHC0 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC20.57■□□□□ 0.88
CAPN8A6NHC0 RGMA-211ENST00000557420 989 ntTSL 3 BASIC20.57■□□□□ 0.88
CAPN8A6NHC0 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CAPN8A6NHC0 MARS-234ENST00000630571 216 ntTSL 5 BASIC20.57■□□□□ 0.88
CAPN8A6NHC0 MARS-235ENST00000630803 183 ntTSL 3 BASIC20.57■□□□□ 0.88
CAPN8A6NHC0 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CAPN8A6NHC0 MKRN4P-201ENST00000444706 1521 ntBASIC20.57■□□□□ 0.88
CAPN8A6NHC0 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CAPN8A6NHC0 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CAPN8A6NHC0 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
CAPN8A6NHC0 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CAPN8A6NHC0 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC20.56■□□□□ 0.88
CAPN8A6NHC0 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CAPN8A6NHC0 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC20.56■□□□□ 0.88
CAPN8A6NHC0 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CAPN8A6NHC0 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC20.56■□□□□ 0.88
CAPN8A6NHC0 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
CAPN8A6NHC0 AC007952.6-201ENST00000573168 2673 ntBASIC20.56■□□□□ 0.88
CAPN8A6NHC0 AC003957.1-201ENST00000625108 2673 ntBASIC20.56■□□□□ 0.88
CAPN8A6NHC0 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CAPN8A6NHC0 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC20.56■□□□□ 0.88
CAPN8A6NHC0 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC20.56■□□□□ 0.88
CAPN8A6NHC0 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
CAPN8A6NHC0 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CAPN8A6NHC0 MCRIP2P1-201ENST00000394346 511 ntBASIC20.56■□□□□ 0.88
CAPN8A6NHC0 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC20.56■□□□□ 0.88
CAPN8A6NHC0 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC20.56■□□□□ 0.88
CAPN8A6NHC0 TSPY6P-201ENST00000448518 926 ntBASIC20.56■□□□□ 0.88
CAPN8A6NHC0 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC20.56■□□□□ 0.88
CAPN8A6NHC0 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC20.56■□□□□ 0.88
CAPN8A6NHC0 PHB2-213ENST00000546111 858 ntTSL 2 BASIC20.56■□□□□ 0.88
CAPN8A6NHC0 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC20.56■□□□□ 0.88
CAPN8A6NHC0 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC20.56■□□□□ 0.88
CAPN8A6NHC0 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
CAPN8A6NHC0 AC006128.1-201ENST00000624704 1661 ntBASIC20.56■□□□□ 0.88
CAPN8A6NHC0 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
CAPN8A6NHC0 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC20.56■□□□□ 0.88
CAPN8A6NHC0 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
CAPN8A6NHC0 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
CAPN8A6NHC0 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CAPN8A6NHC0 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CAPN8A6NHC0 AL391422.3-201ENST00000603791 2761 ntBASIC20.56■□□□□ 0.88
CAPN8A6NHC0 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
CAPN8A6NHC0 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
CAPN8A6NHC0 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC20.55■□□□□ 0.88
CAPN8A6NHC0 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CAPN8A6NHC0 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC20.55■□□□□ 0.88
CAPN8A6NHC0 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
CAPN8A6NHC0 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CAPN8A6NHC0 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CAPN8A6NHC0 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CAPN8A6NHC0 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CAPN8A6NHC0 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC20.55■□□□□ 0.88
CAPN8A6NHC0 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC20.55■□□□□ 0.88
CAPN8A6NHC0 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC20.55■□□□□ 0.88
CAPN8A6NHC0 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
CAPN8A6NHC0 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC20.55■□□□□ 0.88
CAPN8A6NHC0 ISCU-212ENST00000547005 795 ntTSL 3 BASIC20.55■□□□□ 0.88
CAPN8A6NHC0 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC20.55■□□□□ 0.88
CAPN8A6NHC0 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CAPN8A6NHC0 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
CAPN8A6NHC0 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC20.55■□□□□ 0.88
CAPN8A6NHC0 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CAPN8A6NHC0 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC20.55■□□□□ 0.88
CAPN8A6NHC0 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC20.55■□□□□ 0.88
CAPN8A6NHC0 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CAPN8A6NHC0 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC20.55■□□□□ 0.88
CAPN8A6NHC0 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC20.54■□□□□ 0.88
CAPN8A6NHC0 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
CAPN8A6NHC0 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CAPN8A6NHC0 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
CAPN8A6NHC0 AC087633.2-202ENST00000565166 1439 ntBASIC20.54■□□□□ 0.88
CAPN8A6NHC0 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
CAPN8A6NHC0 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CAPN8A6NHC0 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC20.54■□□□□ 0.88
CAPN8A6NHC0 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC20.54■□□□□ 0.88
CAPN8A6NHC0 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
CAPN8A6NHC0 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC20.54■□□□□ 0.88
CAPN8A6NHC0 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CAPN8A6NHC0 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CAPN8A6NHC0 SLC29A4P1-201ENST00000398760 971 ntBASIC20.54■□□□□ 0.88
CAPN8A6NHC0 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
CAPN8A6NHC0 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC20.54■□□□□ 0.88
CAPN8A6NHC0 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC20.54■□□□□ 0.88
CAPN8A6NHC0 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC20.54■□□□□ 0.88
CAPN8A6NHC0 CYP2T3P-201ENST00000601990 817 ntBASIC20.54■□□□□ 0.88
CAPN8A6NHC0 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC20.54■□□□□ 0.88
CAPN8A6NHC0 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CAPN8A6NHC0 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
CAPN8A6NHC0 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
CAPN8A6NHC0 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC20.54■□□□□ 0.88
CAPN8A6NHC0 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CAPN8A6NHC0 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms