Protein–RNA interactions for Protein: A6NGU7

LINC01546, Putative uncharacterized protein encoded by LINC01546, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01546A6NGU7 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
LINC01546A6NGU7 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
LINC01546A6NGU7 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC14.37□□□□□ -0.11
LINC01546A6NGU7 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
LINC01546A6NGU7 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
LINC01546A6NGU7 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
LINC01546A6NGU7 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
LINC01546A6NGU7 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
LINC01546A6NGU7 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC14.37□□□□□ -0.11
LINC01546A6NGU7 AC009237.3-201ENST00000393279 1427 ntBASIC14.37□□□□□ -0.11
LINC01546A6NGU7 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC14.37□□□□□ -0.11
LINC01546A6NGU7 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
LINC01546A6NGU7 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
LINC01546A6NGU7 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
LINC01546A6NGU7 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
LINC01546A6NGU7 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
LINC01546A6NGU7 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
LINC01546A6NGU7 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC14.37□□□□□ -0.11
LINC01546A6NGU7 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
LINC01546A6NGU7 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
LINC01546A6NGU7 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
LINC01546A6NGU7 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
LINC01546A6NGU7 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
LINC01546A6NGU7 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
LINC01546A6NGU7 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
LINC01546A6NGU7 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC14.36□□□□□ -0.11
LINC01546A6NGU7 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
LINC01546A6NGU7 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
LINC01546A6NGU7 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
LINC01546A6NGU7 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC14.36□□□□□ -0.11
LINC01546A6NGU7 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC14.36□□□□□ -0.11
LINC01546A6NGU7 AL033527.3-201ENST00000566366 1196 ntBASIC14.36□□□□□ -0.11
LINC01546A6NGU7 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
LINC01546A6NGU7 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
LINC01546A6NGU7 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
LINC01546A6NGU7 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC14.36□□□□□ -0.11
LINC01546A6NGU7 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
LINC01546A6NGU7 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
LINC01546A6NGU7 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
LINC01546A6NGU7 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
LINC01546A6NGU7 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
LINC01546A6NGU7 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
LINC01546A6NGU7 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
LINC01546A6NGU7 AL032819.2-201ENST00000624543 2162 ntBASIC14.36□□□□□ -0.11
LINC01546A6NGU7 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
LINC01546A6NGU7 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
LINC01546A6NGU7 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
LINC01546A6NGU7 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC14.36□□□□□ -0.11
LINC01546A6NGU7 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
LINC01546A6NGU7 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
LINC01546A6NGU7 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC14.35□□□□□ -0.11
LINC01546A6NGU7 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC14.35□□□□□ -0.11
LINC01546A6NGU7 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
LINC01546A6NGU7 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
LINC01546A6NGU7 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
LINC01546A6NGU7 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
LINC01546A6NGU7 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
LINC01546A6NGU7 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
LINC01546A6NGU7 GUK1-208ENST00000366728 842 ntTSL 2 BASIC14.35□□□□□ -0.11
LINC01546A6NGU7 FXN-202ENST00000396364 980 ntTSL 5 BASIC14.35□□□□□ -0.11
LINC01546A6NGU7 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
LINC01546A6NGU7 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
LINC01546A6NGU7 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
LINC01546A6NGU7 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC14.35□□□□□ -0.11
LINC01546A6NGU7 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
LINC01546A6NGU7 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC14.35□□□□□ -0.11
LINC01546A6NGU7 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
LINC01546A6NGU7 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
LINC01546A6NGU7 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
LINC01546A6NGU7 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
LINC01546A6NGU7 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
LINC01546A6NGU7 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
LINC01546A6NGU7 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC14.35□□□□□ -0.11
LINC01546A6NGU7 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
LINC01546A6NGU7 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
LINC01546A6NGU7 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
LINC01546A6NGU7 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
LINC01546A6NGU7 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LINC01546A6NGU7 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LINC01546A6NGU7 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
LINC01546A6NGU7 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC14.34□□□□□ -0.11
LINC01546A6NGU7 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LINC01546A6NGU7 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LINC01546A6NGU7 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
LINC01546A6NGU7 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC14.34□□□□□ -0.11
LINC01546A6NGU7 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC14.34□□□□□ -0.11
LINC01546A6NGU7 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC14.34□□□□□ -0.11
LINC01546A6NGU7 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC14.34□□□□□ -0.11
LINC01546A6NGU7 ABHD17AP5-201ENST00000580133 923 ntBASIC14.34□□□□□ -0.11
LINC01546A6NGU7 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
LINC01546A6NGU7 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC14.34□□□□□ -0.11
LINC01546A6NGU7 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC14.34□□□□□ -0.11
LINC01546A6NGU7 ASL-203ENST00000380839 1765 ntTSL 5 BASIC14.34□□□□□ -0.11
LINC01546A6NGU7 PXK-203ENST00000383715 1756 ntTSL 5 BASIC14.34□□□□□ -0.11
LINC01546A6NGU7 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
LINC01546A6NGU7 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
LINC01546A6NGU7 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC14.34□□□□□ -0.11
LINC01546A6NGU7 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
LINC01546A6NGU7 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.11
LINC01546A6NGU7 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC14.33□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms