Protein–RNA interactions for Protein: A6NFC5

TMEM235, Transmembrane protein 235, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM235A6NFC5 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TMEM235A6NFC5 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC17.32■□□□□ 0.36
TMEM235A6NFC5 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TMEM235A6NFC5 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
TMEM235A6NFC5 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
TMEM235A6NFC5 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC17.31■□□□□ 0.36
TMEM235A6NFC5 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC17.31■□□□□ 0.36
TMEM235A6NFC5 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
TMEM235A6NFC5 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC17.31■□□□□ 0.36
TMEM235A6NFC5 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC17.31■□□□□ 0.36
TMEM235A6NFC5 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC17.31■□□□□ 0.36
TMEM235A6NFC5 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC17.31■□□□□ 0.36
TMEM235A6NFC5 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
TMEM235A6NFC5 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TMEM235A6NFC5 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
TMEM235A6NFC5 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TMEM235A6NFC5 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TMEM235A6NFC5 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TMEM235A6NFC5 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TMEM235A6NFC5 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TMEM235A6NFC5 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
TMEM235A6NFC5 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
TMEM235A6NFC5 STX6-204ENST00000542060 4809 ntTSL 2 BASIC17.31■□□□□ 0.36
TMEM235A6NFC5 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
TMEM235A6NFC5 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC17.31■□□□□ 0.36
TMEM235A6NFC5 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
TMEM235A6NFC5 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC17.3■□□□□ 0.36
TMEM235A6NFC5 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TMEM235A6NFC5 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TMEM235A6NFC5 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
TMEM235A6NFC5 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TMEM235A6NFC5 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TMEM235A6NFC5 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TMEM235A6NFC5 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC17.3■□□□□ 0.36
TMEM235A6NFC5 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
TMEM235A6NFC5 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC17.3■□□□□ 0.36
TMEM235A6NFC5 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TMEM235A6NFC5 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
TMEM235A6NFC5 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TMEM235A6NFC5 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TMEM235A6NFC5 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TMEM235A6NFC5 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
TMEM235A6NFC5 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TMEM235A6NFC5 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC17.29■□□□□ 0.36
TMEM235A6NFC5 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
TMEM235A6NFC5 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
TMEM235A6NFC5 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
TMEM235A6NFC5 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
TMEM235A6NFC5 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
TMEM235A6NFC5 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
TMEM235A6NFC5 TSPY26P-201ENST00000476365 1326 ntBASIC17.29■□□□□ 0.36
TMEM235A6NFC5 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC17.29■□□□□ 0.36
TMEM235A6NFC5 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
TMEM235A6NFC5 UNC93B3-201ENST00000308076 687 ntBASIC17.29■□□□□ 0.36
TMEM235A6NFC5 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TMEM235A6NFC5 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TMEM235A6NFC5 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TMEM235A6NFC5 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC17.29■□□□□ 0.36
TMEM235A6NFC5 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC17.29■□□□□ 0.36
TMEM235A6NFC5 AC024257.2-201ENST00000549699 147 ntBASIC17.29■□□□□ 0.36
TMEM235A6NFC5 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TMEM235A6NFC5 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC17.29■□□□□ 0.36
TMEM235A6NFC5 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TMEM235A6NFC5 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TMEM235A6NFC5 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TMEM235A6NFC5 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TMEM235A6NFC5 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC17.29■□□□□ 0.36
TMEM235A6NFC5 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TMEM235A6NFC5 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
TMEM235A6NFC5 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TMEM235A6NFC5 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TMEM235A6NFC5 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TMEM235A6NFC5 BX323043.1-201ENST00000641006 1765 ntBASIC17.28■□□□□ 0.36
TMEM235A6NFC5 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
TMEM235A6NFC5 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC17.28■□□□□ 0.36
TMEM235A6NFC5 MFF-207ENST00000409565 1548 ntTSL 2 BASIC17.28■□□□□ 0.36
TMEM235A6NFC5 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TMEM235A6NFC5 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TMEM235A6NFC5 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TMEM235A6NFC5 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TMEM235A6NFC5 AL136116.3-201ENST00000402907 1138 ntBASIC17.28■□□□□ 0.36
TMEM235A6NFC5 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TMEM235A6NFC5 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TMEM235A6NFC5 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
TMEM235A6NFC5 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC17.28■□□□□ 0.36
TMEM235A6NFC5 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TMEM235A6NFC5 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC17.28■□□□□ 0.36
TMEM235A6NFC5 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TMEM235A6NFC5 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
TMEM235A6NFC5 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC17.28■□□□□ 0.36
TMEM235A6NFC5 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TMEM235A6NFC5 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
TMEM235A6NFC5 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TMEM235A6NFC5 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TMEM235A6NFC5 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
TMEM235A6NFC5 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
TMEM235A6NFC5 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC17.27■□□□□ 0.36
TMEM235A6NFC5 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
TMEM235A6NFC5 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TMEM235A6NFC5 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC17.27■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 62.9 ms