Protein–RNA interactions for Protein: A6NED2

RCCD1, RCC1 domain-containing protein 1, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1A6NED2 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC21.62■■□□□ 1.05
RCCD1A6NED2 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
RCCD1A6NED2 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
RCCD1A6NED2 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC21.62■■□□□ 1.05
RCCD1A6NED2 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC21.62■■□□□ 1.05
RCCD1A6NED2 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
RCCD1A6NED2 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
RCCD1A6NED2 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
RCCD1A6NED2 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
RCCD1A6NED2 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC21.62■■□□□ 1.05
RCCD1A6NED2 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC21.62■■□□□ 1.05
RCCD1A6NED2 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC21.62■■□□□ 1.05
RCCD1A6NED2 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC21.62■■□□□ 1.05
RCCD1A6NED2 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
RCCD1A6NED2 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
RCCD1A6NED2 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC21.62■■□□□ 1.05
RCCD1A6NED2 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC21.62■■□□□ 1.05
RCCD1A6NED2 DPP3P2-201ENST00000416030 1696 ntBASIC21.62■■□□□ 1.05
RCCD1A6NED2 KRT8P36-201ENST00000489121 1440 ntBASIC21.62■■□□□ 1.05
RCCD1A6NED2 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
RCCD1A6NED2 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC21.61■■□□□ 1.05
RCCD1A6NED2 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
RCCD1A6NED2 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
RCCD1A6NED2 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
RCCD1A6NED2 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
RCCD1A6NED2 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
RCCD1A6NED2 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
RCCD1A6NED2 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
RCCD1A6NED2 NME4-202ENST00000382940 766 ntTSL 3 BASIC21.61■■□□□ 1.05
RCCD1A6NED2 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
RCCD1A6NED2 AC091799.1-201ENST00000422823 811 ntBASIC21.61■■□□□ 1.05
RCCD1A6NED2 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC21.61■■□□□ 1.05
RCCD1A6NED2 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC21.61■■□□□ 1.05
RCCD1A6NED2 NME4-211ENST00000620944 1193 ntTSL 2 BASIC21.61■■□□□ 1.05
RCCD1A6NED2 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC21.61■■□□□ 1.05
RCCD1A6NED2 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
RCCD1A6NED2 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
RCCD1A6NED2 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
RCCD1A6NED2 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC21.61■■□□□ 1.05
RCCD1A6NED2 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC21.61■■□□□ 1.05
RCCD1A6NED2 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
RCCD1A6NED2 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
RCCD1A6NED2 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC21.61■■□□□ 1.05
RCCD1A6NED2 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
RCCD1A6NED2 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC21.61■■□□□ 1.05
RCCD1A6NED2 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
RCCD1A6NED2 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
RCCD1A6NED2 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC21.6■■□□□ 1.05
RCCD1A6NED2 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
RCCD1A6NED2 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
RCCD1A6NED2 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
RCCD1A6NED2 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
RCCD1A6NED2 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
RCCD1A6NED2 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
RCCD1A6NED2 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC21.6■■□□□ 1.05
RCCD1A6NED2 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC21.6■■□□□ 1.05
RCCD1A6NED2 H19-201ENST00000411754 1788 ntTSL 5 BASIC21.6■■□□□ 1.05
RCCD1A6NED2 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
RCCD1A6NED2 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC21.6■■□□□ 1.05
RCCD1A6NED2 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC21.6■■□□□ 1.05
RCCD1A6NED2 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
RCCD1A6NED2 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
RCCD1A6NED2 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC21.6■■□□□ 1.05
RCCD1A6NED2 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
RCCD1A6NED2 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
RCCD1A6NED2 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC21.59■■□□□ 1.05
RCCD1A6NED2 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC21.59■■□□□ 1.05
RCCD1A6NED2 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
RCCD1A6NED2 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC21.59■■□□□ 1.05
RCCD1A6NED2 AP001160.3-201ENST00000601484 763 ntBASIC21.59■■□□□ 1.05
RCCD1A6NED2 FGF8-207ENST00000618991 856 ntTSL 3 BASIC21.59■■□□□ 1.05
RCCD1A6NED2 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
RCCD1A6NED2 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
RCCD1A6NED2 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
RCCD1A6NED2 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
RCCD1A6NED2 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
RCCD1A6NED2 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC21.59■■□□□ 1.05
RCCD1A6NED2 POLI-202ENST00000406285 2030 ntTSL 2 BASIC21.58■■□□□ 1.05
RCCD1A6NED2 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
RCCD1A6NED2 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
RCCD1A6NED2 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC21.58■■□□□ 1.05
RCCD1A6NED2 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.05
RCCD1A6NED2 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.05
RCCD1A6NED2 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
RCCD1A6NED2 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
RCCD1A6NED2 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC21.58■■□□□ 1.05
RCCD1A6NED2 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
RCCD1A6NED2 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC21.58■■□□□ 1.05
RCCD1A6NED2 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
RCCD1A6NED2 AC018445.3-201ENST00000624177 1945 ntBASIC21.58■■□□□ 1.04
RCCD1A6NED2 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.04
RCCD1A6NED2 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC21.58■■□□□ 1.04
RCCD1A6NED2 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
RCCD1A6NED2 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC21.58■■□□□ 1.04
RCCD1A6NED2 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC21.58■■□□□ 1.04
RCCD1A6NED2 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
RCCD1A6NED2 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
RCCD1A6NED2 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
RCCD1A6NED2 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC21.57■■□□□ 1.04
RCCD1A6NED2 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms