Protein–RNA interactions for Protein: A0A0K0K1D8

TRBV6-1, T-cell receptor beta variable 6-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-1A0A0K0K1D8 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRBV6-1A0A0K0K1D8 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
TRBV6-1A0A0K0K1D8 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC15.19■□□□□ 0.02
TRBV6-1A0A0K0K1D8 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRBV6-1A0A0K0K1D8 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC15.19■□□□□ 0.02
TRBV6-1A0A0K0K1D8 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
TRBV6-1A0A0K0K1D8 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
TRBV6-1A0A0K0K1D8 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRBV6-1A0A0K0K1D8 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
TRBV6-1A0A0K0K1D8 AC093484.2-201ENST00000580996 2166 ntBASIC15.18■□□□□ 0.02
TRBV6-1A0A0K0K1D8 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRBV6-1A0A0K0K1D8 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRBV6-1A0A0K0K1D8 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC15.18■□□□□ 0.02
TRBV6-1A0A0K0K1D8 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
TRBV6-1A0A0K0K1D8 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC15.18■□□□□ 0.02
TRBV6-1A0A0K0K1D8 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRBV6-1A0A0K0K1D8 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC15.18■□□□□ 0.02
TRBV6-1A0A0K0K1D8 PTPA-214ENST00000423100 988 ntTSL 2 BASIC15.18■□□□□ 0.02
TRBV6-1A0A0K0K1D8 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
TRBV6-1A0A0K0K1D8 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC15.18■□□□□ 0.02
TRBV6-1A0A0K0K1D8 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRBV6-1A0A0K0K1D8 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
TRBV6-1A0A0K0K1D8 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
TRBV6-1A0A0K0K1D8 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
TRBV6-1A0A0K0K1D8 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRBV6-1A0A0K0K1D8 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC15.18■□□□□ 0.02
TRBV6-1A0A0K0K1D8 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC15.18■□□□□ 0.02
TRBV6-1A0A0K0K1D8 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC15.18■□□□□ 0.02
TRBV6-1A0A0K0K1D8 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRBV6-1A0A0K0K1D8 DPP3P2-201ENST00000416030 1696 ntBASIC15.18■□□□□ 0.02
TRBV6-1A0A0K0K1D8 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRBV6-1A0A0K0K1D8 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
TRBV6-1A0A0K0K1D8 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC15.18■□□□□ 0.02
TRBV6-1A0A0K0K1D8 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC15.18■□□□□ 0.02
TRBV6-1A0A0K0K1D8 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
TRBV6-1A0A0K0K1D8 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRBV6-1A0A0K0K1D8 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRBV6-1A0A0K0K1D8 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
TRBV6-1A0A0K0K1D8 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRBV6-1A0A0K0K1D8 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRBV6-1A0A0K0K1D8 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRBV6-1A0A0K0K1D8 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC15.17■□□□□ 0.02
TRBV6-1A0A0K0K1D8 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC15.17■□□□□ 0.02
TRBV6-1A0A0K0K1D8 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
TRBV6-1A0A0K0K1D8 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC15.17■□□□□ 0.02
TRBV6-1A0A0K0K1D8 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC15.17■□□□□ 0.02
TRBV6-1A0A0K0K1D8 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRBV6-1A0A0K0K1D8 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC15.17■□□□□ 0.02
TRBV6-1A0A0K0K1D8 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRBV6-1A0A0K0K1D8 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC15.17■□□□□ 0.02
TRBV6-1A0A0K0K1D8 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRBV6-1A0A0K0K1D8 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRBV6-1A0A0K0K1D8 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRBV6-1A0A0K0K1D8 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
TRBV6-1A0A0K0K1D8 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
TRBV6-1A0A0K0K1D8 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
TRBV6-1A0A0K0K1D8 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRBV6-1A0A0K0K1D8 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
TRBV6-1A0A0K0K1D8 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRBV6-1A0A0K0K1D8 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
TRBV6-1A0A0K0K1D8 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TRBV6-1A0A0K0K1D8 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TRBV6-1A0A0K0K1D8 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC15.16■□□□□ 0.02
TRBV6-1A0A0K0K1D8 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC15.16■□□□□ 0.02
TRBV6-1A0A0K0K1D8 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRBV6-1A0A0K0K1D8 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
TRBV6-1A0A0K0K1D8 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
TRBV6-1A0A0K0K1D8 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
TRBV6-1A0A0K0K1D8 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRBV6-1A0A0K0K1D8 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
TRBV6-1A0A0K0K1D8 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRBV6-1A0A0K0K1D8 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
TRBV6-1A0A0K0K1D8 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC15.16■□□□□ 0.02
TRBV6-1A0A0K0K1D8 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TRBV6-1A0A0K0K1D8 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TRBV6-1A0A0K0K1D8 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
TRBV6-1A0A0K0K1D8 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRBV6-1A0A0K0K1D8 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC15.16■□□□□ 0.02
TRBV6-1A0A0K0K1D8 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC15.16■□□□□ 0.02
TRBV6-1A0A0K0K1D8 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC15.16■□□□□ 0.02
TRBV6-1A0A0K0K1D8 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC15.16■□□□□ 0.02
TRBV6-1A0A0K0K1D8 AC120498.10-201ENST00000621827 505 ntBASIC15.16■□□□□ 0.02
TRBV6-1A0A0K0K1D8 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
TRBV6-1A0A0K0K1D8 AL035685.1-201ENST00000636663 812 ntBASIC15.16■□□□□ 0.02
TRBV6-1A0A0K0K1D8 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
TRBV6-1A0A0K0K1D8 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRBV6-1A0A0K0K1D8 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TRBV6-1A0A0K0K1D8 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRBV6-1A0A0K0K1D8 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRBV6-1A0A0K0K1D8 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC15.16■□□□□ 0.02
TRBV6-1A0A0K0K1D8 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRBV6-1A0A0K0K1D8 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC15.15■□□□□ 0.02
TRBV6-1A0A0K0K1D8 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRBV6-1A0A0K0K1D8 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC15.15■□□□□ 0.02
TRBV6-1A0A0K0K1D8 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC15.15■□□□□ 0.02
TRBV6-1A0A0K0K1D8 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRBV6-1A0A0K0K1D8 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRBV6-1A0A0K0K1D8 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC15.15■□□□□ 0.02
TRBV6-1A0A0K0K1D8 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
TRBV6-1A0A0K0K1D8 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC15.15■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms