Protein–RNA interactions for Protein: A0A0A0MS04

TRBV6-7, T-cell receptor beta variable 6-7 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-7A0A0A0MS04 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC17■□□□□ 0.31
TRBV6-7A0A0A0MS04 NME4-211ENST00000620944 1193 ntTSL 2 BASIC17■□□□□ 0.31
TRBV6-7A0A0A0MS04 MIR6084-201ENST00000622012 110 ntBASIC17■□□□□ 0.31
TRBV6-7A0A0A0MS04 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
TRBV6-7A0A0A0MS04 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TRBV6-7A0A0A0MS04 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TRBV6-7A0A0A0MS04 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TRBV6-7A0A0A0MS04 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TRBV6-7A0A0A0MS04 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC17■□□□□ 0.31
TRBV6-7A0A0A0MS04 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC17■□□□□ 0.31
TRBV6-7A0A0A0MS04 TCF3P1-201ENST00000423021 1937 ntBASIC17■□□□□ 0.31
TRBV6-7A0A0A0MS04 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC17■□□□□ 0.31
TRBV6-7A0A0A0MS04 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRBV6-7A0A0A0MS04 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRBV6-7A0A0A0MS04 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRBV6-7A0A0A0MS04 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC16.99■□□□□ 0.31
TRBV6-7A0A0A0MS04 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
TRBV6-7A0A0A0MS04 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRBV6-7A0A0A0MS04 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRBV6-7A0A0A0MS04 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC16.99■□□□□ 0.31
TRBV6-7A0A0A0MS04 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
TRBV6-7A0A0A0MS04 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRBV6-7A0A0A0MS04 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC16.99■□□□□ 0.31
TRBV6-7A0A0A0MS04 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
TRBV6-7A0A0A0MS04 AC120498.10-201ENST00000621827 505 ntBASIC16.99■□□□□ 0.31
TRBV6-7A0A0A0MS04 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRBV6-7A0A0A0MS04 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
TRBV6-7A0A0A0MS04 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
TRBV6-7A0A0A0MS04 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
TRBV6-7A0A0A0MS04 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRBV6-7A0A0A0MS04 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRBV6-7A0A0A0MS04 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRBV6-7A0A0A0MS04 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRBV6-7A0A0A0MS04 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
TRBV6-7A0A0A0MS04 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRBV6-7A0A0A0MS04 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
TRBV6-7A0A0A0MS04 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
TRBV6-7A0A0A0MS04 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
TRBV6-7A0A0A0MS04 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC16.98■□□□□ 0.31
TRBV6-7A0A0A0MS04 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
TRBV6-7A0A0A0MS04 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC16.98■□□□□ 0.31
TRBV6-7A0A0A0MS04 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRBV6-7A0A0A0MS04 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC16.98■□□□□ 0.31
TRBV6-7A0A0A0MS04 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC16.98■□□□□ 0.31
TRBV6-7A0A0A0MS04 AL139246.5-201ENST00000606645 996 ntBASIC16.98■□□□□ 0.31
TRBV6-7A0A0A0MS04 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC16.98■□□□□ 0.31
TRBV6-7A0A0A0MS04 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC16.98■□□□□ 0.31
TRBV6-7A0A0A0MS04 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
TRBV6-7A0A0A0MS04 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRBV6-7A0A0A0MS04 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRBV6-7A0A0A0MS04 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
TRBV6-7A0A0A0MS04 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC16.98■□□□□ 0.31
TRBV6-7A0A0A0MS04 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRBV6-7A0A0A0MS04 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
TRBV6-7A0A0A0MS04 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC16.97■□□□□ 0.31
TRBV6-7A0A0A0MS04 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRBV6-7A0A0A0MS04 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRBV6-7A0A0A0MS04 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC16.97■□□□□ 0.31
TRBV6-7A0A0A0MS04 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRBV6-7A0A0A0MS04 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
TRBV6-7A0A0A0MS04 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRBV6-7A0A0A0MS04 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC16.97■□□□□ 0.31
TRBV6-7A0A0A0MS04 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC16.97■□□□□ 0.31
TRBV6-7A0A0A0MS04 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
TRBV6-7A0A0A0MS04 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRBV6-7A0A0A0MS04 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
TRBV6-7A0A0A0MS04 AC010141.2-201ENST00000452426 721 ntBASIC16.97■□□□□ 0.31
TRBV6-7A0A0A0MS04 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
TRBV6-7A0A0A0MS04 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC16.97■□□□□ 0.31
TRBV6-7A0A0A0MS04 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC16.97■□□□□ 0.31
TRBV6-7A0A0A0MS04 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRBV6-7A0A0A0MS04 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
TRBV6-7A0A0A0MS04 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRBV6-7A0A0A0MS04 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC16.97■□□□□ 0.31
TRBV6-7A0A0A0MS04 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRBV6-7A0A0A0MS04 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
TRBV6-7A0A0A0MS04 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
TRBV6-7A0A0A0MS04 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRBV6-7A0A0A0MS04 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRBV6-7A0A0A0MS04 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRBV6-7A0A0A0MS04 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
TRBV6-7A0A0A0MS04 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRBV6-7A0A0A0MS04 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
TRBV6-7A0A0A0MS04 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC16.96■□□□□ 0.31
TRBV6-7A0A0A0MS04 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRBV6-7A0A0A0MS04 IRS3P-201ENST00000223076 1006 ntBASIC16.96■□□□□ 0.31
TRBV6-7A0A0A0MS04 NAA20-201ENST00000310450 920 ntTSL 2 BASIC16.96■□□□□ 0.31
TRBV6-7A0A0A0MS04 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
TRBV6-7A0A0A0MS04 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
TRBV6-7A0A0A0MS04 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC16.96■□□□□ 0.31
TRBV6-7A0A0A0MS04 AC142381.2-201ENST00000566120 298 ntBASIC16.96■□□□□ 0.31
TRBV6-7A0A0A0MS04 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
TRBV6-7A0A0A0MS04 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC16.96■□□□□ 0.31
TRBV6-7A0A0A0MS04 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
TRBV6-7A0A0A0MS04 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
TRBV6-7A0A0A0MS04 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
TRBV6-7A0A0A0MS04 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
TRBV6-7A0A0A0MS04 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC16.96■□□□□ 0.3
TRBV6-7A0A0A0MS04 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC16.96■□□□□ 0.3
TRBV6-7A0A0A0MS04 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms