Protein–RNA interactions for Protein: A0A075B6T8

TRAV9-1, T-cell receptor alpha variable 9-1 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV9-1A0A075B6T8 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
TRAV9-1A0A075B6T8 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
TRAV9-1A0A075B6T8 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC15.27■□□□□ 0.03
TRAV9-1A0A075B6T8 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
TRAV9-1A0A075B6T8 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
TRAV9-1A0A075B6T8 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
TRAV9-1A0A075B6T8 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
TRAV9-1A0A075B6T8 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
TRAV9-1A0A075B6T8 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC15.27■□□□□ 0.03
TRAV9-1A0A075B6T8 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC15.27■□□□□ 0.03
TRAV9-1A0A075B6T8 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC15.27■□□□□ 0.03
TRAV9-1A0A075B6T8 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC15.27■□□□□ 0.03
TRAV9-1A0A075B6T8 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC15.27■□□□□ 0.03
TRAV9-1A0A075B6T8 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
TRAV9-1A0A075B6T8 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
TRAV9-1A0A075B6T8 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TRAV9-1A0A075B6T8 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TRAV9-1A0A075B6T8 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRAV9-1A0A075B6T8 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
TRAV9-1A0A075B6T8 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
TRAV9-1A0A075B6T8 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRAV9-1A0A075B6T8 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC15.26■□□□□ 0.03
TRAV9-1A0A075B6T8 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRAV9-1A0A075B6T8 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRAV9-1A0A075B6T8 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRAV9-1A0A075B6T8 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRAV9-1A0A075B6T8 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC15.26■□□□□ 0.03
TRAV9-1A0A075B6T8 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
TRAV9-1A0A075B6T8 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRAV9-1A0A075B6T8 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC15.26■□□□□ 0.03
TRAV9-1A0A075B6T8 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRAV9-1A0A075B6T8 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRAV9-1A0A075B6T8 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC15.26■□□□□ 0.03
TRAV9-1A0A075B6T8 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRAV9-1A0A075B6T8 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRAV9-1A0A075B6T8 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
TRAV9-1A0A075B6T8 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
TRAV9-1A0A075B6T8 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
TRAV9-1A0A075B6T8 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC15.25■□□□□ 0.03
TRAV9-1A0A075B6T8 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRAV9-1A0A075B6T8 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRAV9-1A0A075B6T8 AL032819.2-201ENST00000624543 2162 ntBASIC15.25■□□□□ 0.03
TRAV9-1A0A075B6T8 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
TRAV9-1A0A075B6T8 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC15.25■□□□□ 0.03
TRAV9-1A0A075B6T8 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC15.25■□□□□ 0.03
TRAV9-1A0A075B6T8 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC15.25■□□□□ 0.03
TRAV9-1A0A075B6T8 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
TRAV9-1A0A075B6T8 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRAV9-1A0A075B6T8 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRAV9-1A0A075B6T8 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC15.25■□□□□ 0.03
TRAV9-1A0A075B6T8 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRAV9-1A0A075B6T8 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
TRAV9-1A0A075B6T8 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
TRAV9-1A0A075B6T8 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC15.25■□□□□ 0.03
TRAV9-1A0A075B6T8 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TRAV9-1A0A075B6T8 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRAV9-1A0A075B6T8 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
TRAV9-1A0A075B6T8 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRAV9-1A0A075B6T8 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
TRAV9-1A0A075B6T8 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRAV9-1A0A075B6T8 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRAV9-1A0A075B6T8 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
TRAV9-1A0A075B6T8 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRAV9-1A0A075B6T8 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TRAV9-1A0A075B6T8 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC15.25■□□□□ 0.03
TRAV9-1A0A075B6T8 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC15.25■□□□□ 0.03
TRAV9-1A0A075B6T8 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TRAV9-1A0A075B6T8 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRAV9-1A0A075B6T8 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
TRAV9-1A0A075B6T8 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC15.25■□□□□ 0.03
TRAV9-1A0A075B6T8 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRAV9-1A0A075B6T8 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRAV9-1A0A075B6T8 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRAV9-1A0A075B6T8 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRAV9-1A0A075B6T8 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRAV9-1A0A075B6T8 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRAV9-1A0A075B6T8 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC15.24■□□□□ 0.03
TRAV9-1A0A075B6T8 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC15.24■□□□□ 0.03
TRAV9-1A0A075B6T8 AP006587.3-201ENST00000525742 1516 ntBASIC15.24■□□□□ 0.03
TRAV9-1A0A075B6T8 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRAV9-1A0A075B6T8 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRAV9-1A0A075B6T8 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC15.24■□□□□ 0.03
TRAV9-1A0A075B6T8 AC010141.3-201ENST00000456659 717 ntBASIC15.24■□□□□ 0.03
TRAV9-1A0A075B6T8 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRAV9-1A0A075B6T8 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC15.24■□□□□ 0.03
TRAV9-1A0A075B6T8 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC15.24■□□□□ 0.03
TRAV9-1A0A075B6T8 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC15.24■□□□□ 0.03
TRAV9-1A0A075B6T8 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
TRAV9-1A0A075B6T8 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRAV9-1A0A075B6T8 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRAV9-1A0A075B6T8 AC120498.9-201ENST00000339021 3867 ntBASIC15.24■□□□□ 0.03
TRAV9-1A0A075B6T8 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TRAV9-1A0A075B6T8 WAC-202ENST00000347934 2839 ntTSL 5 BASIC15.24■□□□□ 0.03
TRAV9-1A0A075B6T8 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TRAV9-1A0A075B6T8 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRAV9-1A0A075B6T8 AC007613.1-201ENST00000572811 2597 ntBASIC15.24■□□□□ 0.03
TRAV9-1A0A075B6T8 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC15.24■□□□□ 0.03
TRAV9-1A0A075B6T8 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRAV9-1A0A075B6T8 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
TRAV9-1A0A075B6T8 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms