Protein–RNA interactions for Protein: Q6P2Q9

PRPF8, Pre-mRNA-processing-splicing factor 8, humanhuman

Known RBP eCLIP

Length 2,335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8Q6P2Q9 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC13.87□□□□□ -0.197e-9■■□□□ 13.5
PRPF8Q6P2Q9 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC13.87□□□□□ -0.197e-9■■□□□ 13.5
PRPF8Q6P2Q9 ACVR2A-203ENST00000462659 746 ntTSL 313.82□□□□□ -0.27e-9■■□□□ 13.5
PRPF8Q6P2Q9 NME6-215ENST00000454531 552 ntTSL 413.75□□□□□ -0.215e-7■■□□□ 13.5
PRPF8Q6P2Q9 EPS8L2-226ENST00000534027 342 ntTSL 213.6□□□□□ -0.235e-22■■□□□ 13.5
PRPF8Q6P2Q9 AC138894.1-209ENST00000637299 1954 ntTSL 513.51□□□□□ -0.257e-9■■□□□ 13.5
PRPF8Q6P2Q9 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC13.46□□□□□ -0.257e-9■■□□□ 13.5
PRPF8Q6P2Q9 NME6-216ENST00000456495 638 ntTSL 513.44□□□□□ -0.265e-7■■□□□ 13.5
PRPF8Q6P2Q9 ZSWIM7-208ENST00000476496 969 ntTSL 313.44□□□□□ -0.267e-9■■□□□ 13.5
PRPF8Q6P2Q9 AC138894.1-208ENST00000636017 2223 ntTSL 513.38□□□□□ -0.277e-9■■□□□ 13.5
PRPF8Q6P2Q9 LEMD2-213ENST00000514636 544 ntTSL 313.38□□□□□ -0.277e-9■■□□□ 13.5
PRPF8Q6P2Q9 MAX-210ENST00000555419 765 ntTSL 5 BASIC13.37□□□□□ -0.272e-8■■□□□ 13.5
PRPF8Q6P2Q9 NME6-203ENST00000415644 849 ntTSL 2 BASIC13.28□□□□□ -0.285e-7■■□□□ 13.5
PRPF8Q6P2Q9 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.37e-9■■□□□ 13.5
PRPF8Q6P2Q9 AC138894.1-207ENST00000636866 2452 ntTSL 513.09□□□□□ -0.317e-9■■□□□ 13.5
PRPF8Q6P2Q9 CLN3-228ENST00000567804 557 ntTSL 413.05□□□□□ -0.327e-9■■□□□ 13.5
PRPF8Q6P2Q9 CLN3-236ENST00000568558 634 ntTSL 513.05□□□□□ -0.327e-9■■□□□ 13.5
PRPF8Q6P2Q9 CLN3-222ENST00000566083 1409 ntTSL 212.97□□□□□ -0.337e-9■■□□□ 13.5
PRPF8Q6P2Q9 ZSWIM7-215ENST00000497719 721 ntTSL 512.92□□□□□ -0.347e-9■■□□□ 13.5
PRPF8Q6P2Q9 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC12.83□□□□□ -0.367e-9■■□□□ 13.5
PRPF8Q6P2Q9 AC138894.1-202ENST00000637376 2512 ntTSL 512.75□□□□□ -0.377e-9■■□□□ 13.5
PRPF8Q6P2Q9 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.387e-9■■□□□ 13.5
PRPF8Q6P2Q9 CLN3-213ENST00000565047 461 ntTSL 1 (best)12.71□□□□□ -0.387e-9■■□□□ 13.5
PRPF8Q6P2Q9 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.382e-8■■□□□ 13.5
PRPF8Q6P2Q9 RAPGEFL1-208ENST00000543876 560 ntTSL 412.63□□□□□ -0.397e-9■■□□□ 13.5
PRPF8Q6P2Q9 SUN1-227ENST00000469755 592 ntTSL 412.33□□□□□ -0.447e-9■■□□□ 13.5
PRPF8Q6P2Q9 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.447e-9■■□□□ 13.5
PRPF8Q6P2Q9 CFAP36-201ENST00000339012 1373 ntTSL 1 (best) BASIC12.28□□□□□ -0.447e-9■■□□□ 13.5
PRPF8Q6P2Q9 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC12.26□□□□□ -0.452e-8■■□□□ 13.5
PRPF8Q6P2Q9 CLN3-235ENST00000568497 758 ntTSL 312.23□□□□□ -0.457e-9■■□□□ 13.5
PRPF8Q6P2Q9 CLN3-251ENST00000636853 2289 ntTSL 512.15□□□□□ -0.477e-9■■□□□ 13.5
PRPF8Q6P2Q9 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC12.1□□□□□ -0.472e-8■■□□□ 13.5
PRPF8Q6P2Q9 LINC00513-201ENST00000447430 1616 ntTSL 5 BASIC12.09□□□□□ -0.474e-6■■□□□ 13.5
PRPF8Q6P2Q9 NME6-204ENST00000418431 794 ntTSL 312.05□□□□□ -0.485e-7■■□□□ 13.5
PRPF8Q6P2Q9 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.497e-9■■□□□ 13.5
PRPF8Q6P2Q9 AC138894.1-203ENST00000636078 2382 ntTSL 511.84□□□□□ -0.517e-9■■□□□ 13.5
PRPF8Q6P2Q9 ACVR2A-205ENST00000487959 274 ntTSL 411.78□□□□□ -0.527e-9■■□□□ 13.5
PRPF8Q6P2Q9 CFAP36-203ENST00000403007 759 ntTSL 2 BASIC11.73□□□□□ -0.537e-9■■□□□ 13.5
PRPF8Q6P2Q9 MAX-218ENST00000557746 571 ntTSL 4 BASIC11.64□□□□□ -0.552e-8■■□□□ 13.5
PRPF8Q6P2Q9 AC138894.1-204ENST00000636503 2521 ntTSL 511.62□□□□□ -0.557e-9■■□□□ 13.5
PRPF8Q6P2Q9 CLN3-242ENST00000635958 1837 ntTSL 511.51□□□□□ -0.577e-9■■□□□ 13.5
PRPF8Q6P2Q9 ADCY9-202ENST00000571467 569 ntTSL 511.49□□□□□ -0.577e-9■■□□□ 13.5
PRPF8Q6P2Q9 NME6-208ENST00000435684 599 ntTSL 2 BASIC11.47□□□□□ -0.575e-7■■□□□ 13.5
PRPF8Q6P2Q9 CFAP36-204ENST00000406691 1575 ntTSL 1 (best) BASIC11.44□□□□□ -0.587e-9■■□□□ 13.5
PRPF8Q6P2Q9 AC090004.1-201ENST00000608606 653 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.584e-6■■□□□ 13.5
PRPF8Q6P2Q9 AADAT-206ENST00000509167 2113 ntAPPRIS ALT1 TSL 1 (best) BASIC11.42□□□□□ -0.587e-9■■□□□ 13.5
PRPF8Q6P2Q9 RAPGEFL1-205ENST00000538884 540 ntTSL 411.38□□□□□ -0.597e-9■■□□□ 13.5
PRPF8Q6P2Q9 MIS12-203ENST00000574186 267 ntTSL 311.36□□□□□ -0.597e-9■■□□□ 13.5
PRPF8Q6P2Q9 SERGEF-211ENST00000529440 439 ntTSL 211.35□□□□□ -0.597e-9■■□□□ 13.5
PRPF8Q6P2Q9 CLN3-253ENST00000636977 2969 ntTSL 511.32□□□□□ -0.67e-9■■□□□ 13.5
PRPF8Q6P2Q9 ADCY9-203ENST00000571889 585 ntTSL 511.31□□□□□ -0.67e-9■■□□□ 13.5
PRPF8Q6P2Q9 ERP29-202ENST00000455836 1333 ntTSL 2 BASIC11.2□□□□□ -0.625e-29■■□□□ 13.5
PRPF8Q6P2Q9 MIS12-204ENST00000576570 945 ntTSL 310.96□□□□□ -0.657e-9■■□□□ 13.5
PRPF8Q6P2Q9 RAPGEFL1-202ENST00000456989 1582 ntTSL 1 (best) BASIC10.96□□□□□ -0.657e-9■■□□□ 13.5
PRPF8Q6P2Q9 SERGEF-221ENST00000532546 833 ntTSL 310.73□□□□□ -0.697e-9■■□□□ 13.5
PRPF8Q6P2Q9 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC10.72□□□□□ -0.692e-8■■□□□ 13.5
PRPF8Q6P2Q9 ADCY9-204ENST00000572288 772 ntTSL 410.59□□□□□ -0.717e-9■■□□□ 13.5
PRPF8Q6P2Q9 EPN1-204ENST00000586194 583 ntTSL 210.49□□□□□ -0.737e-9■■□□□ 13.5
PRPF8Q6P2Q9 CFAP36-205ENST00000407816 1125 ntAPPRIS ALT2 TSL 5 BASIC10.38□□□□□ -0.757e-9■■□□□ 13.5
PRPF8Q6P2Q9 MAX-212ENST00000555932 1673 ntTSL 5 BASIC10.23□□□□□ -0.772e-8■■□□□ 13.5
PRPF8Q6P2Q9 NME6-218ENST00000494209 1268 ntTSL 310.21□□□□□ -0.775e-7■■□□□ 13.5
PRPF8Q6P2Q9 ZSWIM7-213ENST00000495825 558 ntTSL 310.11□□□□□ -0.797e-9■■□□□ 13.5
PRPF8Q6P2Q9 NME6-211ENST00000447314 621 ntTSL 3 BASIC10.1□□□□□ -0.795e-7■■□□□ 13.5
PRPF8Q6P2Q9 AC138894.1-201ENST00000635887 2824 ntTSL 5 BASIC10.02□□□□□ -0.817e-9■■□□□ 13.5
PRPF8Q6P2Q9 CLN3-210ENST00000563874 3081 ntTSL 29.98□□□□□ -0.817e-9■■□□□ 13.5
PRPF8Q6P2Q9 NME6-206ENST00000425930 613 ntTSL 29.98□□□□□ -0.815e-7■■□□□ 13.5
PRPF8Q6P2Q9 CFAP36-202ENST00000349456 2048 ntAPPRIS P2 TSL 1 (best) BASIC9.94□□□□□ -0.827e-9■■□□□ 13.5
PRPF8Q6P2Q9 MIS12-202ENST00000573759 2204 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.827e-9■■□□□ 13.5
PRPF8Q6P2Q9 MAX-216ENST00000556979 615 ntTSL 3 BASIC9.88□□□□□ -0.832e-8■■□□□ 13.5
PRPF8Q6P2Q9 ERP29-205ENST00000553161 916 ntTSL 1 (best)9.82□□□□□ -0.845e-29■■□□□ 13.5
PRPF8Q6P2Q9 FOXRED2-202ENST00000366463 2489 ntTSL 29.67□□□□□ -0.867e-9■■□□□ 13.5
PRPF8Q6P2Q9 NME6-210ENST00000444069 866 ntTSL 1 (best)9.56□□□□□ -0.885e-7■■□□□ 13.5
PRPF8Q6P2Q9 NME6-207ENST00000426689 1209 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.885e-7■■□□□ 13.5
PRPF8Q6P2Q9 CLN3-238ENST00000569430 3867 ntAPPRIS P1 TSL 5 BASIC9.37□□□□□ -0.917e-9■■□□□ 13.5
PRPF8Q6P2Q9 MAX-206ENST00000394606 2097 ntTSL 1 (best)9.26□□□□□ -0.932e-8■■□□□ 13.5
PRPF8Q6P2Q9 MAX-202ENST00000284165 3155 ntTSL 1 (best) BASIC9.15□□□□□ -0.952e-8■■□□□ 13.5
PRPF8Q6P2Q9 MIS12-206ENST00000611091 2691 ntAPPRIS P1 TSL 2 BASIC9.15□□□□□ -0.957e-9■■□□□ 13.5
PRPF8Q6P2Q9 ERP29-201ENST00000261735 1735 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.955e-29■■□□□ 13.5
PRPF8Q6P2Q9 NME6-205ENST00000421967 2004 ntTSL 1 (best) BASIC9.09□□□□□ -0.955e-7■■□□□ 13.5
PRPF8Q6P2Q9 NME6-202ENST00000415053 913 ntAPPRIS P1 TSL 3 BASIC9.03□□□□□ -0.965e-7■■□□□ 13.5
PRPF8Q6P2Q9 CLN3-244ENST00000636147 3832 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.977e-9■■□□□ 13.5
PRPF8Q6P2Q9 ERP29-204ENST00000552052 284 ntTSL 38.98□□□□□ -0.975e-29■■□□□ 13.5
PRPF8Q6P2Q9 MAX-213ENST00000556443 585 ntTSL 2 BASIC8.92□□□□□ -0.982e-8■■□□□ 13.5
PRPF8Q6P2Q9 NME6-214ENST00000452211 1353 ntAPPRIS P1 TSL 5 BASIC8.86□□□□□ -0.995e-7■■□□□ 13.5
PRPF8Q6P2Q9 ZSWIM7-209ENST00000486655 726 ntTSL 3 BASIC8.62□□□□□ -1.037e-9■■□□□ 13.5
PRPF8Q6P2Q9 ADCY9-206ENST00000575550 569 ntTSL 48.37□□□□□ -1.077e-9■■□□□ 13.5
PRPF8Q6P2Q9 RAPGEFL1-201ENST00000264644 3429 ntTSL 5 BASIC8.37□□□□□ -1.077e-9■■□□□ 13.5
PRPF8Q6P2Q9 ERICH1-205ENST00000519909 636 ntTSL 38.07□□□□□ -1.127e-9■■□□□ 13.5
PRPF8Q6P2Q9 NOMO1-205ENST00000566883 560 ntTSL 48□□□□□ -1.137e-9■■□□□ 13.5
PRPF8Q6P2Q9 NOMO1-203ENST00000566720 548 ntTSL 57.92□□□□□ -1.147e-9■■□□□ 13.5
PRPF8Q6P2Q9 NOMO1-206ENST00000566917 592 ntTSL 27.78□□□□□ -1.167e-9■■□□□ 13.5
PRPF8Q6P2Q9 ZSWIM7-202ENST00000399280 1869 ntTSL 37.61□□□□□ -1.197e-9■■□□□ 13.5
PRPF8Q6P2Q9 APEX1-203ENST00000438886 451 ntTSL 37.15□□□□□ -1.277e-9■■□□□ 13.5
PRPF8Q6P2Q9 LEMD2-211ENST00000513701 555 ntTSL 46.45□□□□□ -1.387e-9■■□□□ 13.5
PRPF8Q6P2Q9 MAX-207ENST00000553928 623 ntTSL 1 (best)6.11□□□□□ -1.432e-8■■□□□ 13.5
PRPF8Q6P2Q9 NME6-212ENST00000447724 668 ntTSL 25.73□□□□□ -1.495e-7■■□□□ 13.5
PRPF8Q6P2Q9 EPN1-206ENST00000589704 250 ntTSL 55.58□□□□□ -1.527e-9■■□□□ 13.5
PRPF8Q6P2Q9 LEMD2-210ENST00000512368 544 ntTSL 45.54□□□□□ -1.527e-9■■□□□ 13.5
PRPF8Q6P2Q9 GGNBP2-213ENST00000615952 665 ntTSL 35.13□□□□□ -1.597e-9■■□□□ 13.5
PRPF8Q6P2Q9 ZFYVE9-204ENST00000371591 4874 ntAPPRIS P4 TSL 1 (best) BASIC5.07□□□□□ -1.67e-9■■□□□ 13.5
Retrieved 100 of 73,762 protein–RNA pairs in 1275.7 ms