Protein–RNA interactions for Protein: Q6P2Q9

PRPF8, Pre-mRNA-processing-splicing factor 8, humanhuman

Known RBP eCLIP

Length 2,335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8Q6P2Q9 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.395e-7■■□□□ 13.7
PRPF8Q6P2Q9 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC12.37□□□□□ -0.435e-7■■□□□ 13.7
PRPF8Q6P2Q9 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC11.44□□□□□ -0.585e-7■■□□□ 13.7
PRPF8Q6P2Q9 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC11.21□□□□□ -0.615e-7■■□□□ 13.7
PRPF8Q6P2Q9 PLXNB1-210ENST00000467913 688 ntTSL 215.46■□□□□ 0.073e-12■■□□□ 13.7
PRPF8Q6P2Q9 PIGG-215ENST00000508562 570 ntTSL 410.85□□□□□ -0.679e-10■■□□□ 13.7
PRPF8Q6P2Q9 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.266e-7■■□□□ 13.7
PRPF8Q6P2Q9 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC12.96□□□□□ -0.336e-7■■□□□ 13.7
PRPF8Q6P2Q9 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC12.74□□□□□ -0.376e-7■■□□□ 13.7
PRPF8Q6P2Q9 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC12.66□□□□□ -0.386e-7■■□□□ 13.7
PRPF8Q6P2Q9 ANKRD10-203ENST00000460846 535 ntTSL 311.27□□□□□ -0.64e-7■■□□□ 13.7
PRPF8Q6P2Q9 FDPS-206ENST00000467076 1178 ntAPPRIS ALT1 TSL 3 BASIC10.77□□□□□ -0.696e-7■■□□□ 13.7
PRPF8Q6P2Q9 FDPS-220ENST00000611010 1196 ntTSL 5 BASIC10.51□□□□□ -0.736e-7■■□□□ 13.7
PRPF8Q6P2Q9 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.038e-12■■□□□ 13.7
PRPF8Q6P2Q9 ZNHIT1-202ENST00000461205 571 ntTSL 37.8□□□□□ -1.168e-12■■□□□ 13.7
PRPF8Q6P2Q9 ZNHIT1-204ENST00000492315 3958 ntTSL 26.24□□□□□ -1.418e-12■■□□□ 13.7
PRPF8Q6P2Q9 COMTD1-206ENST00000491270 473 ntTSL 320.19■□□□□ 0.821e-7■■□□□ 13.7
PRPF8Q6P2Q9 COMTD1-203ENST00000469299 871 ntTSL 319.02■□□□□ 0.641e-7■■□□□ 13.7
PRPF8Q6P2Q9 COMTD1-207ENST00000494596 539 ntTSL 216.8■□□□□ 0.281e-7■■□□□ 13.7
PRPF8Q6P2Q9 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.111e-7■■□□□ 13.7
PRPF8Q6P2Q9 MARK4-209ENST00000592762 683 ntTSL 521.3■■□□□ 12e-6■■□□□ 13.7
PRPF8Q6P2Q9 ARFRP1-204ENST00000609537 593 ntTSL 312.68□□□□□ -0.383e-8■■□□□ 13.7
PRPF8Q6P2Q9 FAM45A-205ENST00000487888 851 ntTSL 214.14□□□□□ -0.153e-11■■□□□ 13.7
PRPF8Q6P2Q9 FAM45A-202ENST00000448258 692 ntTSL 312.34□□□□□ -0.433e-11■■□□□ 13.7
PRPF8Q6P2Q9 FAM45A-209ENST00000497903 699 ntTSL 212.34□□□□□ -0.433e-11■■□□□ 13.7
PRPF8Q6P2Q9 FAM45A-208ENST00000493766 824 ntTSL 312.27□□□□□ -0.443e-11■■□□□ 13.7
PRPF8Q6P2Q9 FAM45A-204ENST00000472379 984 ntTSL 211.68□□□□□ -0.543e-11■■□□□ 13.7
PRPF8Q6P2Q9 ADNP-203ENST00000396029 6261 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.932e-6■■□□□ 13.7
PRPF8Q6P2Q9 ADNP-204ENST00000396032 4581 ntAPPRIS P1 TSL 2 BASIC9.01□□□□□ -0.972e-6■■□□□ 13.7
PRPF8Q6P2Q9 ADNP-206ENST00000621696 6224 ntAPPRIS P1 TSL 5 BASIC8.14□□□□□ -1.112e-6■■□□□ 13.7
PRPF8Q6P2Q9 ITGA5-213ENST00000553071 1013 ntTSL 1 (best)14.19□□□□□ -0.147e-7■■□□□ 13.7
PRPF8Q6P2Q9 ITGA5-202ENST00000435631 1240 ntTSL 212.56□□□□□ -0.47e-7■■□□□ 13.7
PRPF8Q6P2Q9 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.354e-13■■□□□ 13.7
PRPF8Q6P2Q9 WNK2-207ENST00000448251 3224 ntTSL 210.92□□□□□ -0.661e-6■■□□□ 13.7
PRPF8Q6P2Q9 SLC38A3-204ENST00000445096 880 ntTSL 58.02□□□□□ -1.135e-8■■□□□ 13.7
PRPF8Q6P2Q9 AKT1-207ENST00000554192 922 ntTSL 211.93□□□□□ -0.52e-8■■□□□ 13.7
PRPF8Q6P2Q9 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.652e-6■■□□□ 13.7
PRPF8Q6P2Q9 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC14□□□□□ -0.172e-6■■□□□ 13.7
PRPF8Q6P2Q9 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC13.74□□□□□ -0.212e-6■■□□□ 13.7
PRPF8Q6P2Q9 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC13.26□□□□□ -0.292e-6■■□□□ 13.7
PRPF8Q6P2Q9 ARHGDIA-205ENST00000579121 637 ntTSL 313.73□□□□□ -0.212e-9■■□□□ 13.7
PRPF8Q6P2Q9 CLCN7-214ENST00000569851 1014 ntTSL 512.94□□□□□ -0.345e-7■■□□□ 13.7
PRPF8Q6P2Q9 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.553e-10■■□□□ 13.7
PRPF8Q6P2Q9 GSDMD-207ENST00000526469 1643 ntTSL 218.72■□□□□ 0.597e-8■■□□□ 13.7
PRPF8Q6P2Q9 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC19.18■□□□□ 0.663e-6■■□□□ 13.7
PRPF8Q6P2Q9 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.633e-6■■□□□ 13.7
PRPF8Q6P2Q9 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.383e-6■■□□□ 13.7
PRPF8Q6P2Q9 AKT2-220ENST00000486647 457 ntTSL 313.01□□□□□ -0.331e-8■■□□□ 13.7
PRPF8Q6P2Q9 TMEM183A-205ENST00000543891 924 ntTSL 317.85■□□□□ 0.452e-7■■□□□ 13.7
PRPF8Q6P2Q9 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.212e-7■■□□□ 13.7
PRPF8Q6P2Q9 PICALM-207ENST00000526961 802 ntTSL 52.01□□□□□ -2.095e-7■■□□□ 13.7
PRPF8Q6P2Q9 ERBB3-208ENST00000549205 971 ntTSL 510.25□□□□□ -0.775e-8■■□□□ 13.7
PRPF8Q6P2Q9 AC211429.1-201ENST00000415277 523 ntBASIC17.11■□□□□ 0.336e-13■■□□□ 13.7
PRPF8Q6P2Q9 FTCD-211ENST00000494498 840 ntTSL 316.58■□□□□ 0.246e-13■■□□□ 13.7
PRPF8Q6P2Q9 TBC1D8-205ENST00000473937 1093 ntTSL 212.6□□□□□ -0.391e-24■■□□□ 13.7
PRPF8Q6P2Q9 TBC1D8-206ENST00000481317 573 ntTSL 48.62□□□□□ -1.031e-24■■□□□ 13.7
PRPF8Q6P2Q9 POM121C-201ENST00000398379 715 ntTSL 27.52□□□□□ -1.26e-13■■□□□ 13.7
PRPF8Q6P2Q9 OS9-209ENST00000547079 583 ntTSL 39.5□□□□□ -0.893e-7■■□□□ 13.7
PRPF8Q6P2Q9 RBM39-211ENST00000426951 840 ntTSL 1 (best)1.54□□□□□ -2.169e-11■■□□□ 13.7
PRPF8Q6P2Q9 RBM39-231ENST00000477334 949 ntTSL 20.8□□□□□ -2.282e-12■■□□□ 13.7
PRPF8Q6P2Q9 MYRF-208ENST00000546247 645 ntTSL 312.7□□□□□ -0.386e-8■■□□□ 13.7
PRPF8Q6P2Q9 GOLGA2-208ENST00000486411 591 ntTSL 316.44■□□□□ 0.221e-16■■□□□ 13.7
PRPF8Q6P2Q9 EPS8L2-225ENST00000533816 540 ntTSL 517.78■□□□□ 0.441e-14■■□□□ 13.7
PRPF8Q6P2Q9 COBLL1-219ENST00000491126 604 ntTSL 415.86■□□□□ 0.133e-8■■□□□ 13.7
PRPF8Q6P2Q9 COBLL1-212ENST00000456171 1793 ntTSL 213.54□□□□□ -0.243e-8■■□□□ 13.7
PRPF8Q6P2Q9 ZNF317-202ENST00000360385 3955 ntAPPRIS ALT2 TSL 1 (best) BASIC7.44□□□□□ -1.222e-7■■□□□ 13.7
PRPF8Q6P2Q9 ZNF317-201ENST00000247956 4073 ntAPPRIS P3 TSL 1 (best) BASIC6.77□□□□□ -1.332e-7■■□□□ 13.7
PRPF8Q6P2Q9 ZNF317-205ENST00000591278 4186 ntTSL 1 (best)5.99□□□□□ -1.452e-7■■□□□ 13.7
PRPF8Q6P2Q9 CTSA-213ENST00000606782 582 ntTSL 311.57□□□□□ -0.561e-13■■□□□ 13.6
PRPF8Q6P2Q9 INSIG2-205ENST00000479999 532 ntTSL 21.69□□□□□ -2.144e-13■■□□□ 13.6
PRPF8Q6P2Q9 SRSF10-212ENST00000485292 790 ntTSL 212.16□□□□□ -0.465e-12■■□□□ 13.6
PRPF8Q6P2Q9 ESRP2-211ENST00000566774 2072 ntTSL 212.2□□□□□ -0.468e-8■■□□□ 13.6
PRPF8Q6P2Q9 ARID3A-202ENST00000457152 549 ntTSL 511.54□□□□□ -0.568e-7■■□□□ 13.6
PRPF8Q6P2Q9 ITGA2B-209ENST00000592462 3189 ntTSL 514.55□□□□□ -0.083e-6■■□□□ 13.6
PRPF8Q6P2Q9 ITGA2B-202ENST00000587295 496 ntTSL 37.13□□□□□ -1.273e-6■■□□□ 13.6
PRPF8Q6P2Q9 METTL22-204ENST00000561993 656 ntTSL 26.67□□□□□ -1.341e-16■■□□□ 13.6
PRPF8Q6P2Q9 ZFX-205ENST00000419690 300 ntTSL 211.32□□□□□ -0.62e-10■■□□□ 13.6
PRPF8Q6P2Q9 ZFX-206ENST00000428571 600 ntTSL 211.15□□□□□ -0.622e-10■■□□□ 13.6
PRPF8Q6P2Q9 MTFR1L-223ENST00000533762 722 ntTSL 514.14□□□□□ -0.152e-8■■□□□ 13.6
PRPF8Q6P2Q9 MTFR1L-220ENST00000529116 555 ntTSL 413.91□□□□□ -0.182e-8■■□□□ 13.6
PRPF8Q6P2Q9 MTFR1L-216ENST00000525713 575 ntTSL 412.75□□□□□ -0.372e-8■■□□□ 13.6
PRPF8Q6P2Q9 MTFR1L-213ENST00000494293 804 ntTSL 212.57□□□□□ -0.42e-8■■□□□ 13.6
PRPF8Q6P2Q9 MTFR1L-219ENST00000528624 562 ntTSL 411.82□□□□□ -0.522e-8■■□□□ 13.6
PRPF8Q6P2Q9 AL020996.2-202ENST00000527604 334 ntAPPRIS P1 TSL 5 BASIC6.98□□□□□ -1.292e-8■■□□□ 13.6
PRPF8Q6P2Q9 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.329e-8■■□□□ 13.6
PRPF8Q6P2Q9 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC13.02□□□□□ -0.329e-8■■□□□ 13.6
PRPF8Q6P2Q9 ERBB2-213ENST00000582818 529 ntTSL 312.38□□□□□ -0.436e-9■■□□□ 13.6
PRPF8Q6P2Q9 TUBGCP2-207ENST00000480198 1306 ntTSL 214.77□□□□□ -0.042e-7■■□□□ 13.6
PRPF8Q6P2Q9 BMP4-209ENST00000609748 458 nt14.99□□□□□ -0.017e-30■■□□□ 13.6
PRPF8Q6P2Q9 BMP4-204ENST00000558961 495 ntTSL 39.61□□□□□ -0.877e-30■■□□□ 13.6
PRPF8Q6P2Q9 POLRMT-207ENST00000592633 469 ntTSL 212.99□□□□□ -0.334e-9■■□□□ 13.6
PRPF8Q6P2Q9 GDI1-208ENST00000471972 534 ntTSL 210.25□□□□□ -0.777e-13■■□□□ 13.6
PRPF8Q6P2Q9 TSC2-225ENST00000569110 1687 ntTSL 513.45□□□□□ -0.263e-7■■□□□ 13.6
PRPF8Q6P2Q9 TSC2-226ENST00000569930 2621 ntTSL 213.37□□□□□ -0.273e-7■■□□□ 13.6
PRPF8Q6P2Q9 TSC2-216ENST00000497886 3248 ntTSL 210.72□□□□□ -0.692e-7■■□□□ 13.6
PRPF8Q6P2Q9 PKD1P6-202ENST00000424133 2493 ntTSL 1 (best)11.27□□□□□ -0.61e-6■■□□□ 13.6
PRPF8Q6P2Q9 ACADVL-207ENST00000577433 803 ntTSL 214.07□□□□□ -0.162e-9■■□□□ 13.6
PRPF8Q6P2Q9 ELP5-207ENST00000571146 890 ntTSL 311.37□□□□□ -0.592e-9■■□□□ 13.6
PRPF8Q6P2Q9 PTMS-205ENST00000540828 644 ntTSL 1 (best)18.03■□□□□ 0.487e-7■■□□□ 13.6
PRPF8Q6P2Q9 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.437e-7■■□□□ 13.6
Retrieved 100 of 73,762 protein–RNA pairs in 1419.6 ms