Protein–RNA interactions for Protein: O95155

UBE4B, Ubiquitin conjugation factor E4 B, humanhuman

Predictions only

Length 1,302 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4BO95155 AC093458.1-201ENST00000608912 222 ntBASIC9.36□□□□□ -0.91
UBE4BO95155 Z98043.1-201ENST00000624123 339 ntBASIC9.36□□□□□ -0.91
UBE4BO95155 MIR3191-201ENST00000636300 76 ntBASIC9.36□□□□□ -0.91
UBE4BO95155 ARHGEF9-234ENST00000637557 4775 ntTSL 5 BASIC9.36□□□□□ -0.91
UBE4BO95155 COPG1-201ENST00000314797 3078 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
UBE4BO95155 FMO9P-201ENST00000477875 1364 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
UBE4BO95155 AL135818.1-202ENST00000554096 1740 ntTSL 3 BASIC9.36□□□□□ -0.91
UBE4BO95155 MTTP-208ENST00000511045 3154 ntTSL 2 BASIC9.36□□□□□ -0.91
UBE4BO95155 SLC16A12-201ENST00000371790 4617 ntAPPRIS P1 TSL 2 BASIC9.36□□□□□ -0.91
UBE4BO95155 HNRNPK-205ENST00000376281 2928 ntAPPRIS P4 TSL 1 (best) BASIC9.36□□□□□ -0.91
UBE4BO95155 LIMK2-201ENST00000331728 3670 ntAPPRIS P4 TSL 1 (best) BASIC9.36□□□□□ -0.91
UBE4BO95155 LRTOMT-222ENST00000615940 1895 ntTSL 5 BASIC9.36□□□□□ -0.91
UBE4BO95155 NSD1-216ENST00000638627 1866 ntTSL 5 BASIC9.36□□□□□ -0.91
UBE4BO95155 CASP7-207ENST00000452490 2271 ntTSL 2 BASIC9.36□□□□□ -0.91
UBE4BO95155 SNHG14-226ENST00000640631 13074 ntTSL 5 BASIC9.36□□□□□ -0.91
UBE4BO95155 CYP2C19-201ENST00000371321 1901 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
UBE4BO95155 AC024337.1-201ENST00000558860 1562 ntTSL 4 BASIC9.36□□□□□ -0.91
UBE4BO95155 ZNFX1-204ENST00000396105 7371 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
UBE4BO95155 SPINK6-201ENST00000325630 686 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
UBE4BO95155 RN7SKP72-201ENST00000362327 292 ntBASIC9.35□□□□□ -0.91
UBE4BO95155 EP400-204ENST00000389561 12317 ntAPPRIS P1 TSL 5 BASIC9.35□□□□□ -0.91
UBE4BO95155 AL645937.5-202ENST00000415595 944 ntBASIC9.35□□□□□ -0.91
UBE4BO95155 KRT223P-201ENST00000422957 519 ntTSL 2 BASIC9.35□□□□□ -0.91
UBE4BO95155 APCDD1L-AS1-204ENST00000427794 461 ntTSL 3 BASIC9.35□□□□□ -0.91
UBE4BO95155 LINC00445-202ENST00000456848 643 ntTSL 3 BASIC9.35□□□□□ -0.91
UBE4BO95155 AC125618.1-201ENST00000472596 563 ntTSL 4 BASIC9.35□□□□□ -0.91
UBE4BO95155 RN7SL580P-201ENST00000492489 287 ntBASIC9.35□□□□□ -0.91
UBE4BO95155 OR10J2P-201ENST00000514684 961 ntBASIC9.35□□□□□ -0.91
UBE4BO95155 IGHVII-30-1-201ENST00000522218 301 ntBASIC9.35□□□□□ -0.91
UBE4BO95155 TMEM132D-AS1-206ENST00000541320 440 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
UBE4BO95155 AL096869.2-202ENST00000557007 1237 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
UBE4BO95155 AC087639.1-201ENST00000560974 920 ntBASIC9.35□□□□□ -0.91
UBE4BO95155 AC099684.3-201ENST00000574483 560 ntTSL 4 BASIC9.35□□□□□ -0.91
UBE4BO95155 CFAP52-208ENST00000576499 711 ntTSL 3 BASIC9.35□□□□□ -0.91
UBE4BO95155 RN7SL155P-201ENST00000581538 263 ntBASIC9.35□□□□□ -0.91
UBE4BO95155 AC008622.1-201ENST00000597106 284 ntBASIC9.35□□□□□ -0.91
UBE4BO95155 ZNF559-ZNF177-205ENST00000602856 419 ntTSL 5 BASIC9.35□□□□□ -0.91
UBE4BO95155 AL627309.1-205ENST00000610542 723 ntTSL 5 BASIC9.35□□□□□ -0.91
UBE4BO95155 Metazoa_SRP.165-201ENST00000615681 260 ntBASIC9.35□□□□□ -0.91
UBE4BO95155 Metazoa_SRP.58-201ENST00000618720 282 ntBASIC9.35□□□□□ -0.91
UBE4BO95155 Metazoa_SRP.176-201ENST00000619772 282 ntBASIC9.35□□□□□ -0.91
UBE4BO95155 CU638689.4-208ENST00000623324 936 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
UBE4BO95155 CU634019.6-203ENST00000624728 936 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
UBE4BO95155 AC009971.1-201ENST00000634253 673 ntTSL 5 BASIC9.35□□□□□ -0.91
UBE4BO95155 MGAT5-201ENST00000281923 8144 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
UBE4BO95155 TMEM35A-201ENST00000372930 2195 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
UBE4BO95155 LINC02436-202ENST00000509017 2186 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
UBE4BO95155 SZT2-210ENST00000634258 11045 ntAPPRIS ALT2 TSL 5 BASIC9.35□□□□□ -0.91
UBE4BO95155 TMEM19-204ENST00000549735 1772 ntTSL 2 BASIC9.35□□□□□ -0.91
UBE4BO95155 LRRC37A-202ENST00000393465 4997 ntAPPRIS ALT2 TSL 5 BASIC9.35□□□□□ -0.91
UBE4BO95155 CSF2RA-205ENST00000381524 2291 ntAPPRIS P3 TSL 1 (best) BASIC9.35□□□□□ -0.91
UBE4BO95155 STAG3-202ENST00000394018 4163 ntAPPRIS ALT2 TSL 2 BASIC9.35□□□□□ -0.91
UBE4BO95155 TMEM169-201ENST00000295658 3342 ntAPPRIS P1 TSL 2 BASIC9.35□□□□□ -0.91
UBE4BO95155 SERPINA1-206ENST00000437397 3340 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
UBE4BO95155 CADM2-203ENST00000407528 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC9.35□□□□□ -0.91
UBE4BO95155 AC109826.1-201ENST00000419865 1424 ntTSL 5 BASIC9.35□□□□□ -0.91
UBE4BO95155 LINC01133-203ENST00000635112 1996 ntTSL 5 BASIC9.35□□□□□ -0.91
UBE4BO95155 AHCYL2-208ENST00000474594 2047 ntTSL 2 BASIC9.35□□□□□ -0.91
UBE4BO95155 SGMS2-202ENST00000394684 6149 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
UBE4BO95155 CC2D2A-204ENST00000503292 5175 ntAPPRIS P3 TSL 1 (best) BASIC9.35□□□□□ -0.91
UBE4BO95155 AL627309.1-201ENST00000466430 2748 ntTSL 5 BASIC9.35□□□□□ -0.91
UBE4BO95155 PTPDC1-201ENST00000288976 4398 ntAPPRIS P4 TSL 1 (best) BASIC9.35□□□□□ -0.91
UBE4BO95155 PPARA-203ENST00000407236 9995 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
UBE4BO95155 HSPD1P6-201ENST00000388967 1683 ntBASIC9.35□□□□□ -0.91
UBE4BO95155 PTCD3-201ENST00000254630 6734 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
UBE4BO95155 ERMAP-202ENST00000372514 3369 ntAPPRIS P2 TSL 1 (best) BASIC9.35□□□□□ -0.91
UBE4BO95155 PLXDC2-203ENST00000377252 12468 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
UBE4BO95155 UBAP2L-202ENST00000343815 3411 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
UBE4BO95155 CERS6-AS1-201ENST00000425636 2890 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
UBE4BO95155 AC021054.1-201ENST00000537514 2338 ntTSL 2 BASIC9.35□□□□□ -0.91
UBE4BO95155 PSEN1-205ENST00000406768 4062 ntTSL 2 BASIC9.35□□□□□ -0.91
UBE4BO95155 RFX3-202ENST00000358730 2971 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
UBE4BO95155 OR4L1-201ENST00000315683 939 ntAPPRIS P1 BASIC9.34□□□□□ -0.91
UBE4BO95155 TNNT3-202ENST00000344578 794 ntAPPRIS ALT2 TSL 5 BASIC9.34□□□□□ -0.91
UBE4BO95155 TGIF1-203ENST00000345133 1088 ntTSL 3 BASIC9.34□□□□□ -0.91
UBE4BO95155 TNNT3-205ENST00000381563 844 ntAPPRIS ALT2 TSL 5 BASIC9.34□□□□□ -0.91
UBE4BO95155 TNNT3-209ENST00000397304 720 ntAPPRIS ALT2 TSL 5 BASIC9.34□□□□□ -0.91
UBE4BO95155 RN7SKP181-201ENST00000411188 316 ntBASIC9.34□□□□□ -0.91
UBE4BO95155 AC064862.3-201ENST00000411435 571 ntBASIC9.34□□□□□ -0.91
UBE4BO95155 AC146944.2-202ENST00000425529 658 ntTSL 3 BASIC9.34□□□□□ -0.91
UBE4BO95155 AC112493.1-202ENST00000436019 673 ntTSL 3 BASIC9.34□□□□□ -0.91
UBE4BO95155 SDHDP2-201ENST00000436937 465 ntBASIC9.34□□□□□ -0.91
UBE4BO95155 AC244102.1-201ENST00000437309 848 ntTSL 3 BASIC9.34□□□□□ -0.91
UBE4BO95155 TNNT3-210ENST00000446240 720 ntAPPRIS ALT2 TSL 5 BASIC9.34□□□□□ -0.91
UBE4BO95155 RN7SL448P-201ENST00000475566 295 ntBASIC9.34□□□□□ -0.91
UBE4BO95155 FTH1P4-201ENST00000480365 553 ntBASIC9.34□□□□□ -0.91
UBE4BO95155 RN7SL598P-201ENST00000494391 294 ntBASIC9.34□□□□□ -0.91
UBE4BO95155 AC096751.2-201ENST00000507483 792 ntTSL 3 BASIC9.34□□□□□ -0.91
UBE4BO95155 AC005833.4-201ENST00000542988 449 ntTSL 3 BASIC9.34□□□□□ -0.91
UBE4BO95155 TMEM106C-212ENST00000549288 321 ntTSL 3 BASIC9.34□□□□□ -0.91
UBE4BO95155 AC023794.4-201ENST00000551732 754 ntTSL 5 BASIC9.34□□□□□ -0.91
UBE4BO95155 RN7SL847P-201ENST00000582819 270 ntBASIC9.34□□□□□ -0.91
UBE4BO95155 MIR5008-201ENST00000584300 94 ntBASIC9.34□□□□□ -0.91
UBE4BO95155 AC004257.1-201ENST00000593588 277 ntTSL 5 BASIC9.34□□□□□ -0.91
UBE4BO95155 KHDC1-206ENST00000610330 632 ntAPPRIS ALT2 TSL 5 BASIC9.34□□□□□ -0.91
UBE4BO95155 LINC01170-202ENST00000628324 650 ntTSL 2 BASIC9.34□□□□□ -0.91
UBE4BO95155 AL121594.6-201ENST00000633440 261 ntBASIC9.34□□□□□ -0.91
UBE4BO95155 TNNT3-218ENST00000641787 924 ntAPPRIS ALT2 BASIC9.34□□□□□ -0.91
UBE4BO95155 MAPK10-228ENST00000512689 2583 ntTSL 5 BASIC9.34□□□□□ -0.91
UBE4BO95155 ECM2-201ENST00000344604 3253 ntAPPRIS P3 TSL 1 (best) BASIC9.34□□□□□ -0.91
Retrieved 100 of 98,524 protein–RNA pairs in 133.8 ms