Protein–RNA interactions for Protein: Q9Y2U8

LEMD3, Inner nuclear membrane protein Man1, humanhuman

Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3Q9Y2U8 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
LEMD3Q9Y2U8 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC24.87■■□□□ 1.57
LEMD3Q9Y2U8 KRT8P36-201ENST00000489121 1440 ntBASIC24.86■■□□□ 1.57
LEMD3Q9Y2U8 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
LEMD3Q9Y2U8 STK25-205ENST00000405883 1904 ntTSL 2 BASIC24.86■■□□□ 1.57
LEMD3Q9Y2U8 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
LEMD3Q9Y2U8 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
LEMD3Q9Y2U8 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC24.86■■□□□ 1.57
LEMD3Q9Y2U8 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC24.86■■□□□ 1.57
LEMD3Q9Y2U8 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
LEMD3Q9Y2U8 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC24.86■■□□□ 1.57
LEMD3Q9Y2U8 TK2-204ENST00000525974 1178 ntTSL 2 BASIC24.86■■□□□ 1.57
LEMD3Q9Y2U8 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
LEMD3Q9Y2U8 MIR2861-201ENST00000636310 90 ntBASIC24.86■■□□□ 1.57
LEMD3Q9Y2U8 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
LEMD3Q9Y2U8 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
LEMD3Q9Y2U8 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC24.86■■□□□ 1.57
LEMD3Q9Y2U8 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC24.86■■□□□ 1.57
LEMD3Q9Y2U8 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
LEMD3Q9Y2U8 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC24.85■■□□□ 1.57
LEMD3Q9Y2U8 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC24.85■■□□□ 1.57
LEMD3Q9Y2U8 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC24.85■■□□□ 1.57
LEMD3Q9Y2U8 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC24.85■■□□□ 1.57
LEMD3Q9Y2U8 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
LEMD3Q9Y2U8 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC24.85■■□□□ 1.57
LEMD3Q9Y2U8 KRASP1-201ENST00000407852 552 ntBASIC24.85■■□□□ 1.57
LEMD3Q9Y2U8 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC24.85■■□□□ 1.57
LEMD3Q9Y2U8 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC24.85■■□□□ 1.57
LEMD3Q9Y2U8 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC24.85■■□□□ 1.57
LEMD3Q9Y2U8 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC24.85■■□□□ 1.57
LEMD3Q9Y2U8 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC24.85■■□□□ 1.57
LEMD3Q9Y2U8 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC24.85■■□□□ 1.57
LEMD3Q9Y2U8 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
LEMD3Q9Y2U8 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC24.85■■□□□ 1.57
LEMD3Q9Y2U8 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
LEMD3Q9Y2U8 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
LEMD3Q9Y2U8 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
LEMD3Q9Y2U8 Z98882.1-201ENST00000622160 2253 ntBASIC24.84■■□□□ 1.57
LEMD3Q9Y2U8 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
LEMD3Q9Y2U8 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
LEMD3Q9Y2U8 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
LEMD3Q9Y2U8 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
LEMD3Q9Y2U8 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC24.84■■□□□ 1.57
LEMD3Q9Y2U8 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC24.84■■□□□ 1.57
LEMD3Q9Y2U8 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC24.84■■□□□ 1.57
LEMD3Q9Y2U8 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC24.84■■□□□ 1.57
LEMD3Q9Y2U8 HES2-206ENST00000489730 730 ntTSL 2 BASIC24.84■■□□□ 1.57
LEMD3Q9Y2U8 AC023632.3-201ENST00000521633 145 ntBASIC24.84■■□□□ 1.57
LEMD3Q9Y2U8 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC24.84■■□□□ 1.57
LEMD3Q9Y2U8 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC24.84■■□□□ 1.57
LEMD3Q9Y2U8 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
LEMD3Q9Y2U8 AL117328.2-201ENST00000624617 1940 ntBASIC24.84■■□□□ 1.57
LEMD3Q9Y2U8 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC24.84■■□□□ 1.57
LEMD3Q9Y2U8 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC24.84■■□□□ 1.57
LEMD3Q9Y2U8 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC24.83■■□□□ 1.57
LEMD3Q9Y2U8 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
LEMD3Q9Y2U8 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC24.83■■□□□ 1.57
LEMD3Q9Y2U8 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC24.83■■□□□ 1.57
LEMD3Q9Y2U8 AC073912.3-201ENST00000624414 853 ntBASIC24.83■■□□□ 1.57
LEMD3Q9Y2U8 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
LEMD3Q9Y2U8 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC24.83■■□□□ 1.57
LEMD3Q9Y2U8 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC24.83■■□□□ 1.56
LEMD3Q9Y2U8 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC24.83■■□□□ 1.56
LEMD3Q9Y2U8 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC24.83■■□□□ 1.56
LEMD3Q9Y2U8 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.56
LEMD3Q9Y2U8 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC24.83■■□□□ 1.56
LEMD3Q9Y2U8 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
LEMD3Q9Y2U8 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
LEMD3Q9Y2U8 GXYLT1P3-201ENST00000453058 1193 ntBASIC24.82■■□□□ 1.56
LEMD3Q9Y2U8 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
LEMD3Q9Y2U8 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
LEMD3Q9Y2U8 MYB-221ENST00000527615 2381 ntTSL 5 BASIC24.82■■□□□ 1.56
LEMD3Q9Y2U8 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
LEMD3Q9Y2U8 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
LEMD3Q9Y2U8 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
LEMD3Q9Y2U8 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC24.82■■□□□ 1.56
LEMD3Q9Y2U8 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC24.82■■□□□ 1.56
LEMD3Q9Y2U8 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
LEMD3Q9Y2U8 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
LEMD3Q9Y2U8 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
LEMD3Q9Y2U8 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
LEMD3Q9Y2U8 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
LEMD3Q9Y2U8 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
LEMD3Q9Y2U8 AL135905.2-201ENST00000584934 1404 ntBASIC24.81■■□□□ 1.56
LEMD3Q9Y2U8 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
LEMD3Q9Y2U8 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
LEMD3Q9Y2U8 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC24.81■■□□□ 1.56
LEMD3Q9Y2U8 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC24.81■■□□□ 1.56
LEMD3Q9Y2U8 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
LEMD3Q9Y2U8 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC24.81■■□□□ 1.56
LEMD3Q9Y2U8 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC24.81■■□□□ 1.56
LEMD3Q9Y2U8 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC24.81■■□□□ 1.56
LEMD3Q9Y2U8 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC24.81■■□□□ 1.56
LEMD3Q9Y2U8 REXO2-216ENST00000544196 452 ntTSL 3 BASIC24.81■■□□□ 1.56
LEMD3Q9Y2U8 AP001412.1-201ENST00000608405 714 ntBASIC24.81■■□□□ 1.56
LEMD3Q9Y2U8 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC24.81■■□□□ 1.56
LEMD3Q9Y2U8 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC24.81■■□□□ 1.56
LEMD3Q9Y2U8 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC24.81■■□□□ 1.56
LEMD3Q9Y2U8 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC24.81■■□□□ 1.56
LEMD3Q9Y2U8 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC24.81■■□□□ 1.56
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms