Protein–RNA interactions for Protein: Q9UPU9

SAMD4A, Protein Smaug homolog 1, humanhuman

Known RBP Predictions only

Length 718 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SAMD4AQ9UPU9 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SAMD4AQ9UPU9 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
SAMD4AQ9UPU9 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SAMD4AQ9UPU9 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
SAMD4AQ9UPU9 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC19.02■□□□□ 0.64
SAMD4AQ9UPU9 MIR2861-201ENST00000636310 90 ntBASIC19.02■□□□□ 0.64
SAMD4AQ9UPU9 CPT2-209ENST00000636935 803 ntTSL 5 BASIC19.02■□□□□ 0.64
SAMD4AQ9UPU9 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
SAMD4AQ9UPU9 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
SAMD4AQ9UPU9 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
SAMD4AQ9UPU9 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
SAMD4AQ9UPU9 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
SAMD4AQ9UPU9 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC19.01■□□□□ 0.63
SAMD4AQ9UPU9 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SAMD4AQ9UPU9 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SAMD4AQ9UPU9 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC19.01■□□□□ 0.63
SAMD4AQ9UPU9 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SAMD4AQ9UPU9 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
SAMD4AQ9UPU9 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SAMD4AQ9UPU9 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC19.01■□□□□ 0.63
SAMD4AQ9UPU9 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SAMD4AQ9UPU9 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
SAMD4AQ9UPU9 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
SAMD4AQ9UPU9 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SAMD4AQ9UPU9 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
SAMD4AQ9UPU9 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SAMD4AQ9UPU9 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SAMD4AQ9UPU9 KRT16P2-201ENST00000414673 1423 ntBASIC19■□□□□ 0.63
SAMD4AQ9UPU9 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC19■□□□□ 0.63
SAMD4AQ9UPU9 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
SAMD4AQ9UPU9 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SAMD4AQ9UPU9 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
SAMD4AQ9UPU9 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC19■□□□□ 0.63
SAMD4AQ9UPU9 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SAMD4AQ9UPU9 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC19■□□□□ 0.63
SAMD4AQ9UPU9 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC19■□□□□ 0.63
SAMD4AQ9UPU9 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SAMD4AQ9UPU9 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC19■□□□□ 0.63
SAMD4AQ9UPU9 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC19■□□□□ 0.63
SAMD4AQ9UPU9 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
SAMD4AQ9UPU9 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SAMD4AQ9UPU9 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC19■□□□□ 0.63
SAMD4AQ9UPU9 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SAMD4AQ9UPU9 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC19■□□□□ 0.63
SAMD4AQ9UPU9 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
SAMD4AQ9UPU9 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
SAMD4AQ9UPU9 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC19■□□□□ 0.63
SAMD4AQ9UPU9 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SAMD4AQ9UPU9 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SAMD4AQ9UPU9 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC19■□□□□ 0.63
SAMD4AQ9UPU9 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC19■□□□□ 0.63
SAMD4AQ9UPU9 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC19■□□□□ 0.63
SAMD4AQ9UPU9 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
SAMD4AQ9UPU9 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
SAMD4AQ9UPU9 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC18.99■□□□□ 0.63
SAMD4AQ9UPU9 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC18.99■□□□□ 0.63
SAMD4AQ9UPU9 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SAMD4AQ9UPU9 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SAMD4AQ9UPU9 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
SAMD4AQ9UPU9 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
SAMD4AQ9UPU9 AC012414.1-201ENST00000556676 535 ntBASIC18.99■□□□□ 0.63
SAMD4AQ9UPU9 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC18.99■□□□□ 0.63
SAMD4AQ9UPU9 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC18.99■□□□□ 0.63
SAMD4AQ9UPU9 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SAMD4AQ9UPU9 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
SAMD4AQ9UPU9 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC18.99■□□□□ 0.63
SAMD4AQ9UPU9 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC18.99■□□□□ 0.63
SAMD4AQ9UPU9 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC18.99■□□□□ 0.63
SAMD4AQ9UPU9 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
SAMD4AQ9UPU9 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC18.99■□□□□ 0.63
SAMD4AQ9UPU9 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
SAMD4AQ9UPU9 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC18.99■□□□□ 0.63
SAMD4AQ9UPU9 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
SAMD4AQ9UPU9 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
SAMD4AQ9UPU9 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
SAMD4AQ9UPU9 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
SAMD4AQ9UPU9 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
SAMD4AQ9UPU9 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
SAMD4AQ9UPU9 AC116050.2-201ENST00000612102 1779 ntBASIC18.98■□□□□ 0.63
SAMD4AQ9UPU9 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC18.98■□□□□ 0.63
SAMD4AQ9UPU9 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SAMD4AQ9UPU9 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
SAMD4AQ9UPU9 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
SAMD4AQ9UPU9 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SAMD4AQ9UPU9 AC116562.4-201ENST00000641316 2276 ntBASIC18.98■□□□□ 0.63
SAMD4AQ9UPU9 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
SAMD4AQ9UPU9 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
SAMD4AQ9UPU9 GRAMD4P4-201ENST00000613563 1115 ntBASIC18.98■□□□□ 0.63
SAMD4AQ9UPU9 AC120498.10-201ENST00000621827 505 ntBASIC18.98■□□□□ 0.63
SAMD4AQ9UPU9 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC18.98■□□□□ 0.63
SAMD4AQ9UPU9 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
SAMD4AQ9UPU9 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SAMD4AQ9UPU9 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC18.98■□□□□ 0.63
SAMD4AQ9UPU9 AC087289.5-201ENST00000586076 3175 ntBASIC18.98■□□□□ 0.63
SAMD4AQ9UPU9 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC18.98■□□□□ 0.63
SAMD4AQ9UPU9 BX323043.1-201ENST00000641006 1765 ntBASIC18.98■□□□□ 0.63
SAMD4AQ9UPU9 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC18.98■□□□□ 0.63
SAMD4AQ9UPU9 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC18.98■□□□□ 0.63
SAMD4AQ9UPU9 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SAMD4AQ9UPU9 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms