Protein–RNA interactions for Protein: Q9UBK2

PPARGC1A, Peroxisome proliferator-activated receptor gamma coactivator 1-alpha, humanhuman

Known RBP Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1AQ9UBK2 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC21.17■□□□□ 0.98
PPARGC1AQ9UBK2 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PPARGC1AQ9UBK2 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC21.16■□□□□ 0.98
PPARGC1AQ9UBK2 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
PPARGC1AQ9UBK2 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
PPARGC1AQ9UBK2 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC21.16■□□□□ 0.98
PPARGC1AQ9UBK2 STAC-204ENST00000457375 1366 ntTSL 2 BASIC21.16■□□□□ 0.98
PPARGC1AQ9UBK2 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC21.16■□□□□ 0.98
PPARGC1AQ9UBK2 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
PPARGC1AQ9UBK2 GPX1P1-201ENST00000388829 606 ntBASIC21.16■□□□□ 0.98
PPARGC1AQ9UBK2 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC21.16■□□□□ 0.98
PPARGC1AQ9UBK2 AC093787.1-201ENST00000450396 207 ntBASIC21.16■□□□□ 0.98
PPARGC1AQ9UBK2 AC083906.2-201ENST00000511578 360 ntBASIC21.16■□□□□ 0.98
PPARGC1AQ9UBK2 AC105036.2-201ENST00000569468 176 ntBASIC21.16■□□□□ 0.98
PPARGC1AQ9UBK2 GXYLT1P5-201ENST00000614548 1189 ntBASIC21.16■□□□□ 0.98
PPARGC1AQ9UBK2 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
PPARGC1AQ9UBK2 AC092667.1-201ENST00000434301 2586 ntBASIC21.16■□□□□ 0.98
PPARGC1AQ9UBK2 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
PPARGC1AQ9UBK2 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PPARGC1AQ9UBK2 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PPARGC1AQ9UBK2 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC21.15■□□□□ 0.98
PPARGC1AQ9UBK2 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC21.15■□□□□ 0.98
PPARGC1AQ9UBK2 AC027702.1-201ENST00000563810 1770 ntBASIC21.15■□□□□ 0.98
PPARGC1AQ9UBK2 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC21.15■□□□□ 0.98
PPARGC1AQ9UBK2 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC21.15■□□□□ 0.98
PPARGC1AQ9UBK2 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
PPARGC1AQ9UBK2 AC010980.2-201ENST00000587099 1412 ntBASIC21.15■□□□□ 0.98
PPARGC1AQ9UBK2 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC21.15■□□□□ 0.98
PPARGC1AQ9UBK2 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
PPARGC1AQ9UBK2 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
PPARGC1AQ9UBK2 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PPARGC1AQ9UBK2 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC21.15■□□□□ 0.98
PPARGC1AQ9UBK2 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PPARGC1AQ9UBK2 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PPARGC1AQ9UBK2 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
PPARGC1AQ9UBK2 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
PPARGC1AQ9UBK2 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PPARGC1AQ9UBK2 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PPARGC1AQ9UBK2 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
PPARGC1AQ9UBK2 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
PPARGC1AQ9UBK2 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PPARGC1AQ9UBK2 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC21.14■□□□□ 0.98
PPARGC1AQ9UBK2 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.98
PPARGC1AQ9UBK2 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
PPARGC1AQ9UBK2 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC21.14■□□□□ 0.98
PPARGC1AQ9UBK2 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
PPARGC1AQ9UBK2 LINC01521-201ENST00000504184 1943 ntBASIC21.14■□□□□ 0.98
PPARGC1AQ9UBK2 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
PPARGC1AQ9UBK2 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
PPARGC1AQ9UBK2 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
PPARGC1AQ9UBK2 MCRIP2P1-201ENST00000394346 511 ntBASIC21.14■□□□□ 0.97
PPARGC1AQ9UBK2 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC21.14■□□□□ 0.97
PPARGC1AQ9UBK2 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
PPARGC1AQ9UBK2 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
PPARGC1AQ9UBK2 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
PPARGC1AQ9UBK2 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
PPARGC1AQ9UBK2 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC21.14■□□□□ 0.97
PPARGC1AQ9UBK2 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
PPARGC1AQ9UBK2 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
PPARGC1AQ9UBK2 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC21.14■□□□□ 0.97
PPARGC1AQ9UBK2 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC21.14■□□□□ 0.97
PPARGC1AQ9UBK2 CYP21A1P-202ENST00000354927 1481 ntBASIC21.13■□□□□ 0.97
PPARGC1AQ9UBK2 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
PPARGC1AQ9UBK2 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PPARGC1AQ9UBK2 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PPARGC1AQ9UBK2 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC21.13■□□□□ 0.97
PPARGC1AQ9UBK2 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
PPARGC1AQ9UBK2 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC21.13■□□□□ 0.97
PPARGC1AQ9UBK2 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
PPARGC1AQ9UBK2 AC006128.1-201ENST00000624704 1661 ntBASIC21.13■□□□□ 0.97
PPARGC1AQ9UBK2 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC21.13■□□□□ 0.97
PPARGC1AQ9UBK2 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PPARGC1AQ9UBK2 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PPARGC1AQ9UBK2 GUSBP6-202ENST00000438529 1198 ntBASIC21.13■□□□□ 0.97
PPARGC1AQ9UBK2 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC21.13■□□□□ 0.97
PPARGC1AQ9UBK2 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC21.13■□□□□ 0.97
PPARGC1AQ9UBK2 WT1-AS_3.1-201ENST00000613262 234 ntBASIC21.13■□□□□ 0.97
PPARGC1AQ9UBK2 MARS-234ENST00000630571 216 ntTSL 5 BASIC21.13■□□□□ 0.97
PPARGC1AQ9UBK2 MARS-235ENST00000630803 183 ntTSL 3 BASIC21.13■□□□□ 0.97
PPARGC1AQ9UBK2 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
PPARGC1AQ9UBK2 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC21.13■□□□□ 0.97
PPARGC1AQ9UBK2 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC21.13■□□□□ 0.97
PPARGC1AQ9UBK2 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
PPARGC1AQ9UBK2 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
PPARGC1AQ9UBK2 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PPARGC1AQ9UBK2 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
PPARGC1AQ9UBK2 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
PPARGC1AQ9UBK2 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC21.13■□□□□ 0.97
PPARGC1AQ9UBK2 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PPARGC1AQ9UBK2 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
PPARGC1AQ9UBK2 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
PPARGC1AQ9UBK2 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PPARGC1AQ9UBK2 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC21.12■□□□□ 0.97
PPARGC1AQ9UBK2 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
PPARGC1AQ9UBK2 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PPARGC1AQ9UBK2 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC21.12■□□□□ 0.97
PPARGC1AQ9UBK2 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
PPARGC1AQ9UBK2 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
PPARGC1AQ9UBK2 TSPY6P-201ENST00000448518 926 ntBASIC21.12■□□□□ 0.97
PPARGC1AQ9UBK2 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC21.12■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms