Protein–RNA interactions for Protein: Q9P0V3

SH3BP4, SH3 domain-binding protein 4, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3BP4Q9P0V3 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC19.42■□□□□ 0.7
SH3BP4Q9P0V3 AC092720.2-201ENST00000602388 1665 ntBASIC19.42■□□□□ 0.7
SH3BP4Q9P0V3 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SH3BP4Q9P0V3 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SH3BP4Q9P0V3 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
SH3BP4Q9P0V3 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC19.41■□□□□ 0.7
SH3BP4Q9P0V3 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SH3BP4Q9P0V3 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SH3BP4Q9P0V3 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC19.41■□□□□ 0.7
SH3BP4Q9P0V3 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SH3BP4Q9P0V3 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SH3BP4Q9P0V3 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
SH3BP4Q9P0V3 AL512408.1-201ENST00000569378 2000 ntBASIC19.41■□□□□ 0.7
SH3BP4Q9P0V3 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SH3BP4Q9P0V3 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SH3BP4Q9P0V3 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC19.41■□□□□ 0.7
SH3BP4Q9P0V3 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC19.41■□□□□ 0.7
SH3BP4Q9P0V3 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SH3BP4Q9P0V3 SLC7A5P1-201ENST00000568957 537 ntBASIC19.41■□□□□ 0.7
SH3BP4Q9P0V3 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SH3BP4Q9P0V3 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC19.41■□□□□ 0.7
SH3BP4Q9P0V3 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC19.41■□□□□ 0.7
SH3BP4Q9P0V3 RBM17P2-201ENST00000616397 1405 ntBASIC19.41■□□□□ 0.7
SH3BP4Q9P0V3 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SH3BP4Q9P0V3 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SH3BP4Q9P0V3 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SH3BP4Q9P0V3 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SH3BP4Q9P0V3 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
SH3BP4Q9P0V3 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC19.4■□□□□ 0.7
SH3BP4Q9P0V3 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
SH3BP4Q9P0V3 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
SH3BP4Q9P0V3 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
SH3BP4Q9P0V3 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
SH3BP4Q9P0V3 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC19.4■□□□□ 0.7
SH3BP4Q9P0V3 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SH3BP4Q9P0V3 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
SH3BP4Q9P0V3 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
SH3BP4Q9P0V3 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
SH3BP4Q9P0V3 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC19.4■□□□□ 0.7
SH3BP4Q9P0V3 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
SH3BP4Q9P0V3 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
SH3BP4Q9P0V3 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SH3BP4Q9P0V3 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SH3BP4Q9P0V3 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SH3BP4Q9P0V3 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC19.4■□□□□ 0.7
SH3BP4Q9P0V3 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
SH3BP4Q9P0V3 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
SH3BP4Q9P0V3 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SH3BP4Q9P0V3 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC19.4■□□□□ 0.7
SH3BP4Q9P0V3 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC19.4■□□□□ 0.7
SH3BP4Q9P0V3 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SH3BP4Q9P0V3 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SH3BP4Q9P0V3 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
SH3BP4Q9P0V3 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
SH3BP4Q9P0V3 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
SH3BP4Q9P0V3 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC19.39■□□□□ 0.7
SH3BP4Q9P0V3 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SH3BP4Q9P0V3 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC19.39■□□□□ 0.69
SH3BP4Q9P0V3 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SH3BP4Q9P0V3 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC19.39■□□□□ 0.69
SH3BP4Q9P0V3 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC19.39■□□□□ 0.69
SH3BP4Q9P0V3 AC091799.1-201ENST00000422823 811 ntBASIC19.39■□□□□ 0.69
SH3BP4Q9P0V3 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC19.39■□□□□ 0.69
SH3BP4Q9P0V3 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC19.39■□□□□ 0.69
SH3BP4Q9P0V3 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
SH3BP4Q9P0V3 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC19.39■□□□□ 0.69
SH3BP4Q9P0V3 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC19.39■□□□□ 0.69
SH3BP4Q9P0V3 KRT18P61-201ENST00000585825 1298 ntBASIC19.39■□□□□ 0.69
SH3BP4Q9P0V3 AC243732.1-201ENST00000612648 864 ntBASIC19.39■□□□□ 0.69
SH3BP4Q9P0V3 MIR2861-201ENST00000636310 90 ntBASIC19.39■□□□□ 0.69
SH3BP4Q9P0V3 AC019069.1-201ENST00000610008 1333 ntBASIC19.39■□□□□ 0.69
SH3BP4Q9P0V3 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SH3BP4Q9P0V3 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC19.39■□□□□ 0.69
SH3BP4Q9P0V3 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SH3BP4Q9P0V3 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
SH3BP4Q9P0V3 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SH3BP4Q9P0V3 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC19.39■□□□□ 0.69
SH3BP4Q9P0V3 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC19.39■□□□□ 0.69
SH3BP4Q9P0V3 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SH3BP4Q9P0V3 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SH3BP4Q9P0V3 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SH3BP4Q9P0V3 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
SH3BP4Q9P0V3 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SH3BP4Q9P0V3 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SH3BP4Q9P0V3 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SH3BP4Q9P0V3 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SH3BP4Q9P0V3 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC19.38■□□□□ 0.69
SH3BP4Q9P0V3 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SH3BP4Q9P0V3 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC19.38■□□□□ 0.69
SH3BP4Q9P0V3 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
SH3BP4Q9P0V3 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SH3BP4Q9P0V3 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC19.38■□□□□ 0.69
SH3BP4Q9P0V3 AC007322.3-201ENST00000426526 701 ntBASIC19.38■□□□□ 0.69
SH3BP4Q9P0V3 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
SH3BP4Q9P0V3 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SH3BP4Q9P0V3 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC19.38■□□□□ 0.69
SH3BP4Q9P0V3 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
SH3BP4Q9P0V3 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
SH3BP4Q9P0V3 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC19.38■□□□□ 0.69
SH3BP4Q9P0V3 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms