Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CHD8Q9HCK8 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CHD8Q9HCK8 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC19.18■□□□□ 0.66
CHD8Q9HCK8 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC19.18■□□□□ 0.66
CHD8Q9HCK8 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CHD8Q9HCK8 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CHD8Q9HCK8 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CHD8Q9HCK8 KSR1P1-201ENST00000446298 240 ntBASIC19.18■□□□□ 0.66
CHD8Q9HCK8 KRT17P6-201ENST00000453795 1220 ntBASIC19.18■□□□□ 0.66
CHD8Q9HCK8 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC19.18■□□□□ 0.66
CHD8Q9HCK8 AC091390.4-202ENST00000476426 537 ntBASIC19.18■□□□□ 0.66
CHD8Q9HCK8 AL121829.2-201ENST00000620908 328 ntBASIC19.18■□□□□ 0.66
CHD8Q9HCK8 AC011558.1-201ENST00000623459 338 ntBASIC19.18■□□□□ 0.66
CHD8Q9HCK8 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC19.18■□□□□ 0.66
CHD8Q9HCK8 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC19.18■□□□□ 0.66
CHD8Q9HCK8 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
CHD8Q9HCK8 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CHD8Q9HCK8 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
CHD8Q9HCK8 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC19.17■□□□□ 0.66
CHD8Q9HCK8 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CHD8Q9HCK8 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC19.17■□□□□ 0.66
CHD8Q9HCK8 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC19.17■□□□□ 0.66
CHD8Q9HCK8 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC19.17■□□□□ 0.66
CHD8Q9HCK8 AC004264.1-201ENST00000608354 794 ntBASIC19.17■□□□□ 0.66
CHD8Q9HCK8 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CHD8Q9HCK8 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC19.17■□□□□ 0.66
CHD8Q9HCK8 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CHD8Q9HCK8 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CHD8Q9HCK8 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CHD8Q9HCK8 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC19.17■□□□□ 0.66
CHD8Q9HCK8 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CHD8Q9HCK8 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
CHD8Q9HCK8 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CHD8Q9HCK8 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC19.17■□□□□ 0.66
CHD8Q9HCK8 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CHD8Q9HCK8 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CHD8Q9HCK8 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC19.16■□□□□ 0.66
CHD8Q9HCK8 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CHD8Q9HCK8 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
CHD8Q9HCK8 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CHD8Q9HCK8 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CHD8Q9HCK8 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
CHD8Q9HCK8 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
CHD8Q9HCK8 RER1-204ENST00000378518 522 ntTSL 3 BASIC19.16■□□□□ 0.66
CHD8Q9HCK8 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC19.16■□□□□ 0.66
CHD8Q9HCK8 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CHD8Q9HCK8 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC19.16■□□□□ 0.66
CHD8Q9HCK8 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CHD8Q9HCK8 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC19.16■□□□□ 0.66
CHD8Q9HCK8 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CHD8Q9HCK8 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
CHD8Q9HCK8 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CHD8Q9HCK8 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CHD8Q9HCK8 INGX-201ENST00000359239 846 ntBASIC19.15■□□□□ 0.66
CHD8Q9HCK8 TSPY5P-201ENST00000426936 936 ntBASIC19.15■□□□□ 0.66
CHD8Q9HCK8 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC19.15■□□□□ 0.66
CHD8Q9HCK8 AC130371.2-201ENST00000619443 611 ntBASIC19.15■□□□□ 0.66
CHD8Q9HCK8 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CHD8Q9HCK8 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
CHD8Q9HCK8 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
CHD8Q9HCK8 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
CHD8Q9HCK8 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
CHD8Q9HCK8 AC005332.1-201ENST00000577698 1310 ntBASIC19.15■□□□□ 0.66
CHD8Q9HCK8 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC19.15■□□□□ 0.66
CHD8Q9HCK8 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
CHD8Q9HCK8 IER3-202ENST00000376377 1350 ntBASIC19.15■□□□□ 0.66
CHD8Q9HCK8 AC137767.1-201ENST00000602918 1920 ntBASIC19.15■□□□□ 0.66
CHD8Q9HCK8 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.66
CHD8Q9HCK8 EED-207ENST00000528180 1745 ntTSL 5 BASIC19.14■□□□□ 0.66
CHD8Q9HCK8 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
CHD8Q9HCK8 AL390719.1-204ENST00000412397 1219 ntBASIC19.14■□□□□ 0.65
CHD8Q9HCK8 TSPY21P-201ENST00000433481 731 ntBASIC19.14■□□□□ 0.65
CHD8Q9HCK8 TSPY23P-201ENST00000440136 739 ntBASIC19.14■□□□□ 0.65
CHD8Q9HCK8 AL671277.2-201ENST00000458060 996 ntBASIC19.14■□□□□ 0.65
CHD8Q9HCK8 CFL1-212ENST00000531413 636 ntTSL 3 BASIC19.14■□□□□ 0.65
CHD8Q9HCK8 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CHD8Q9HCK8 AL671883.3-201ENST00000603274 991 ntBASIC19.14■□□□□ 0.65
CHD8Q9HCK8 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CHD8Q9HCK8 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CHD8Q9HCK8 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CHD8Q9HCK8 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CHD8Q9HCK8 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CHD8Q9HCK8 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CHD8Q9HCK8 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
CHD8Q9HCK8 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC19.14■□□□□ 0.65
CHD8Q9HCK8 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CHD8Q9HCK8 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
CHD8Q9HCK8 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CHD8Q9HCK8 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CHD8Q9HCK8 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
CHD8Q9HCK8 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
CHD8Q9HCK8 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC19.13■□□□□ 0.65
CHD8Q9HCK8 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC19.13■□□□□ 0.65
CHD8Q9HCK8 CKBP1-201ENST00000565489 1086 ntBASIC19.13■□□□□ 0.65
CHD8Q9HCK8 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC19.13■□□□□ 0.65
CHD8Q9HCK8 KRT16P1-201ENST00000399124 1418 ntBASIC19.13■□□□□ 0.65
CHD8Q9HCK8 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CHD8Q9HCK8 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CHD8Q9HCK8 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CHD8Q9HCK8 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms