Protein–RNA interactions for Protein: Q9H321

VCX3B, Variable charge X-linked protein 3B, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3BQ9H321 TK2-202ENST00000417693 1046 ntTSL 2 BASIC19.39■□□□□ 0.69
VCX3BQ9H321 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
VCX3BQ9H321 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
VCX3BQ9H321 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
VCX3BQ9H321 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
VCX3BQ9H321 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
VCX3BQ9H321 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
VCX3BQ9H321 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC19.39■□□□□ 0.69
VCX3BQ9H321 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
VCX3BQ9H321 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC19.39■□□□□ 0.69
VCX3BQ9H321 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC19.39■□□□□ 0.69
VCX3BQ9H321 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
VCX3BQ9H321 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC19.38■□□□□ 0.69
VCX3BQ9H321 NEFHP1-201ENST00000412845 2629 ntBASIC19.38■□□□□ 0.69
VCX3BQ9H321 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
VCX3BQ9H321 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
VCX3BQ9H321 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
VCX3BQ9H321 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
VCX3BQ9H321 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
VCX3BQ9H321 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC19.38■□□□□ 0.69
VCX3BQ9H321 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
VCX3BQ9H321 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC19.38■□□□□ 0.69
VCX3BQ9H321 AC087239.1-201ENST00000622671 572 ntBASIC19.38■□□□□ 0.69
VCX3BQ9H321 AC125437.2-201ENST00000625180 2167 ntBASIC19.38■□□□□ 0.69
VCX3BQ9H321 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
VCX3BQ9H321 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
VCX3BQ9H321 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC19.37■□□□□ 0.69
VCX3BQ9H321 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
VCX3BQ9H321 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
VCX3BQ9H321 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
VCX3BQ9H321 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC19.37■□□□□ 0.69
VCX3BQ9H321 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC19.37■□□□□ 0.69
VCX3BQ9H321 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
VCX3BQ9H321 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
VCX3BQ9H321 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
VCX3BQ9H321 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC19.37■□□□□ 0.69
VCX3BQ9H321 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
VCX3BQ9H321 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
VCX3BQ9H321 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
VCX3BQ9H321 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
VCX3BQ9H321 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
VCX3BQ9H321 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
VCX3BQ9H321 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
VCX3BQ9H321 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC19.37■□□□□ 0.69
VCX3BQ9H321 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
VCX3BQ9H321 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
VCX3BQ9H321 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
VCX3BQ9H321 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
VCX3BQ9H321 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
VCX3BQ9H321 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
VCX3BQ9H321 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
VCX3BQ9H321 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
VCX3BQ9H321 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
VCX3BQ9H321 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
VCX3BQ9H321 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC19.36■□□□□ 0.69
VCX3BQ9H321 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
VCX3BQ9H321 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC19.36■□□□□ 0.69
VCX3BQ9H321 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
VCX3BQ9H321 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
VCX3BQ9H321 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
VCX3BQ9H321 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
VCX3BQ9H321 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC19.36■□□□□ 0.69
VCX3BQ9H321 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
VCX3BQ9H321 AC009102.2-201ENST00000606772 1639 ntBASIC19.36■□□□□ 0.69
VCX3BQ9H321 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
VCX3BQ9H321 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
VCX3BQ9H321 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
VCX3BQ9H321 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC19.35■□□□□ 0.69
VCX3BQ9H321 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
VCX3BQ9H321 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
VCX3BQ9H321 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC19.35■□□□□ 0.69
VCX3BQ9H321 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
VCX3BQ9H321 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC19.35■□□□□ 0.69
VCX3BQ9H321 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC19.35■□□□□ 0.69
VCX3BQ9H321 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC19.35■□□□□ 0.69
VCX3BQ9H321 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
VCX3BQ9H321 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
VCX3BQ9H321 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
VCX3BQ9H321 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
VCX3BQ9H321 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC19.35■□□□□ 0.69
VCX3BQ9H321 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
VCX3BQ9H321 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC19.34■□□□□ 0.69
VCX3BQ9H321 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
VCX3BQ9H321 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
VCX3BQ9H321 AC092720.2-201ENST00000602388 1665 ntBASIC19.34■□□□□ 0.69
VCX3BQ9H321 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
VCX3BQ9H321 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
VCX3BQ9H321 VGF-203ENST00000611537 1622 ntTSL 5 BASIC19.34■□□□□ 0.69
VCX3BQ9H321 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
VCX3BQ9H321 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
VCX3BQ9H321 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
VCX3BQ9H321 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
VCX3BQ9H321 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC19.34■□□□□ 0.69
VCX3BQ9H321 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
VCX3BQ9H321 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC19.34■□□□□ 0.69
VCX3BQ9H321 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
VCX3BQ9H321 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC19.34■□□□□ 0.69
VCX3BQ9H321 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
VCX3BQ9H321 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
VCX3BQ9H321 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC19.34■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms