Protein–RNA interactions for Protein: Q9BT23

LIMD2, LIM domain-containing protein 2, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2Q9BT23 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
LIMD2Q9BT23 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
LIMD2Q9BT23 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
LIMD2Q9BT23 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC12.08□□□□□ -0.48
LIMD2Q9BT23 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
LIMD2Q9BT23 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
LIMD2Q9BT23 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
LIMD2Q9BT23 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
LIMD2Q9BT23 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
LIMD2Q9BT23 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
LIMD2Q9BT23 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
LIMD2Q9BT23 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC12.08□□□□□ -0.48
LIMD2Q9BT23 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
LIMD2Q9BT23 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
LIMD2Q9BT23 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
LIMD2Q9BT23 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
LIMD2Q9BT23 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC12.08□□□□□ -0.48
LIMD2Q9BT23 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
LIMD2Q9BT23 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
LIMD2Q9BT23 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
LIMD2Q9BT23 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC12.07□□□□□ -0.48
LIMD2Q9BT23 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
LIMD2Q9BT23 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
LIMD2Q9BT23 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
LIMD2Q9BT23 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
LIMD2Q9BT23 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
LIMD2Q9BT23 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
LIMD2Q9BT23 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
LIMD2Q9BT23 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
LIMD2Q9BT23 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
LIMD2Q9BT23 FEM1AP4-201ENST00000443167 1987 ntBASIC12.07□□□□□ -0.48
LIMD2Q9BT23 DYM-203ENST00000442713 2147 ntTSL 2 BASIC12.07□□□□□ -0.48
LIMD2Q9BT23 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC12.07□□□□□ -0.48
LIMD2Q9BT23 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
LIMD2Q9BT23 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
LIMD2Q9BT23 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
LIMD2Q9BT23 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
LIMD2Q9BT23 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC12.07□□□□□ -0.48
LIMD2Q9BT23 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC12.07□□□□□ -0.48
LIMD2Q9BT23 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC12.07□□□□□ -0.48
LIMD2Q9BT23 TPRG1LP1-201ENST00000598702 760 ntBASIC12.07□□□□□ -0.48
LIMD2Q9BT23 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC12.07□□□□□ -0.48
LIMD2Q9BT23 NFIC-211ENST00000641145 8399 ntBASIC12.07□□□□□ -0.48
LIMD2Q9BT23 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
LIMD2Q9BT23 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
LIMD2Q9BT23 AP004607.4-201ENST00000530158 1459 ntBASIC12.07□□□□□ -0.48
LIMD2Q9BT23 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
LIMD2Q9BT23 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC12.07□□□□□ -0.48
LIMD2Q9BT23 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
LIMD2Q9BT23 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC12.06□□□□□ -0.48
LIMD2Q9BT23 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
LIMD2Q9BT23 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
LIMD2Q9BT23 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
LIMD2Q9BT23 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
LIMD2Q9BT23 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC12.06□□□□□ -0.48
LIMD2Q9BT23 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
LIMD2Q9BT23 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
LIMD2Q9BT23 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
LIMD2Q9BT23 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
LIMD2Q9BT23 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
LIMD2Q9BT23 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
LIMD2Q9BT23 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
LIMD2Q9BT23 MIR638-201ENST00000385237 100 ntBASIC12.06□□□□□ -0.48
LIMD2Q9BT23 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
LIMD2Q9BT23 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC12.06□□□□□ -0.48
LIMD2Q9BT23 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC12.06□□□□□ -0.48
LIMD2Q9BT23 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC12.06□□□□□ -0.48
LIMD2Q9BT23 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC12.06□□□□□ -0.48
LIMD2Q9BT23 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC12.06□□□□□ -0.48
LIMD2Q9BT23 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC12.06□□□□□ -0.48
LIMD2Q9BT23 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
LIMD2Q9BT23 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC12.06□□□□□ -0.48
LIMD2Q9BT23 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
LIMD2Q9BT23 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
LIMD2Q9BT23 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC12.06□□□□□ -0.48
LIMD2Q9BT23 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
LIMD2Q9BT23 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC12.06□□□□□ -0.48
LIMD2Q9BT23 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC12.06□□□□□ -0.48
LIMD2Q9BT23 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC12.06□□□□□ -0.48
LIMD2Q9BT23 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
LIMD2Q9BT23 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
LIMD2Q9BT23 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
LIMD2Q9BT23 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
LIMD2Q9BT23 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
LIMD2Q9BT23 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC12.06□□□□□ -0.48
LIMD2Q9BT23 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC12.06□□□□□ -0.48
LIMD2Q9BT23 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
LIMD2Q9BT23 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
LIMD2Q9BT23 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC12.05□□□□□ -0.48
LIMD2Q9BT23 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
LIMD2Q9BT23 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
LIMD2Q9BT23 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
LIMD2Q9BT23 AL049796.1-201ENST00000565336 1766 ntBASIC12.05□□□□□ -0.48
LIMD2Q9BT23 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC12.05□□□□□ -0.48
LIMD2Q9BT23 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
LIMD2Q9BT23 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
LIMD2Q9BT23 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
LIMD2Q9BT23 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
LIMD2Q9BT23 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
LIMD2Q9BT23 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC12.05□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms