Protein–RNA interactions for Protein: Q99742

NPAS1, Neuronal PAS domain-containing protein 1, humanhuman

Predictions only

Length 590 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS1Q99742 TSPY6P-201ENST00000448518 926 ntBASIC18.55■□□□□ 0.56
NPAS1Q99742 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
NPAS1Q99742 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC18.55■□□□□ 0.56
NPAS1Q99742 AC104771.1-201ENST00000603335 964 ntBASIC18.55■□□□□ 0.56
NPAS1Q99742 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
NPAS1Q99742 AC008694.1-202ENST00000636953 945 ntBASIC18.55■□□□□ 0.56
NPAS1Q99742 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC18.55■□□□□ 0.56
NPAS1Q99742 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
NPAS1Q99742 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC18.55■□□□□ 0.56
NPAS1Q99742 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
NPAS1Q99742 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
NPAS1Q99742 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
NPAS1Q99742 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
NPAS1Q99742 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
NPAS1Q99742 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
NPAS1Q99742 KRT17P1-201ENST00000399211 1546 ntBASIC18.54■□□□□ 0.56
NPAS1Q99742 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC18.54■□□□□ 0.56
NPAS1Q99742 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
NPAS1Q99742 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC18.54■□□□□ 0.56
NPAS1Q99742 AC007225.1-201ENST00000566331 1836 ntBASIC18.54■□□□□ 0.56
NPAS1Q99742 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC18.54■□□□□ 0.56
NPAS1Q99742 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
NPAS1Q99742 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC18.54■□□□□ 0.56
NPAS1Q99742 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
NPAS1Q99742 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC18.54■□□□□ 0.56
NPAS1Q99742 AL512625.2-201ENST00000417533 625 ntBASIC18.54■□□□□ 0.56
NPAS1Q99742 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
NPAS1Q99742 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC18.54■□□□□ 0.56
NPAS1Q99742 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
NPAS1Q99742 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
NPAS1Q99742 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC18.54■□□□□ 0.56
NPAS1Q99742 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
NPAS1Q99742 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
NPAS1Q99742 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
NPAS1Q99742 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
NPAS1Q99742 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
NPAS1Q99742 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
NPAS1Q99742 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
NPAS1Q99742 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC18.53■□□□□ 0.56
NPAS1Q99742 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
NPAS1Q99742 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
NPAS1Q99742 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
NPAS1Q99742 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
NPAS1Q99742 BID-203ENST00000399765 1879 ntTSL 2 BASIC18.53■□□□□ 0.56
NPAS1Q99742 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC18.53■□□□□ 0.56
NPAS1Q99742 AC098934.4-201ENST00000564127 592 ntBASIC18.53■□□□□ 0.56
NPAS1Q99742 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC18.53■□□□□ 0.56
NPAS1Q99742 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC18.53■□□□□ 0.56
NPAS1Q99742 AL109923.1-201ENST00000618799 583 ntBASIC18.53■□□□□ 0.56
NPAS1Q99742 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
NPAS1Q99742 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC18.53■□□□□ 0.56
NPAS1Q99742 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
NPAS1Q99742 MKRN4P-201ENST00000444706 1521 ntBASIC18.53■□□□□ 0.56
NPAS1Q99742 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
NPAS1Q99742 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
NPAS1Q99742 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
NPAS1Q99742 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
NPAS1Q99742 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
NPAS1Q99742 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
NPAS1Q99742 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
NPAS1Q99742 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
NPAS1Q99742 AL138781.1-201ENST00000566567 1274 ntBASIC18.52■□□□□ 0.56
NPAS1Q99742 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC18.52■□□□□ 0.56
NPAS1Q99742 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
NPAS1Q99742 CYP2T3P-201ENST00000601990 817 ntBASIC18.52■□□□□ 0.56
NPAS1Q99742 MIR2861-201ENST00000636310 90 ntBASIC18.52■□□□□ 0.56
NPAS1Q99742 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
NPAS1Q99742 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC18.52■□□□□ 0.56
NPAS1Q99742 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.55
NPAS1Q99742 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
NPAS1Q99742 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
NPAS1Q99742 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC18.52■□□□□ 0.55
NPAS1Q99742 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
NPAS1Q99742 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.55
NPAS1Q99742 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC18.51■□□□□ 0.55
NPAS1Q99742 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
NPAS1Q99742 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
NPAS1Q99742 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
NPAS1Q99742 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
NPAS1Q99742 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
NPAS1Q99742 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
NPAS1Q99742 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC18.51■□□□□ 0.55
NPAS1Q99742 ID1-201ENST00000376105 1233 ntBASIC18.51■□□□□ 0.55
NPAS1Q99742 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC18.51■□□□□ 0.55
NPAS1Q99742 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
NPAS1Q99742 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC18.51■□□□□ 0.55
NPAS1Q99742 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC18.51■□□□□ 0.55
NPAS1Q99742 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC18.51■□□□□ 0.55
NPAS1Q99742 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
NPAS1Q99742 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
NPAS1Q99742 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
NPAS1Q99742 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
NPAS1Q99742 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC18.51■□□□□ 0.55
NPAS1Q99742 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
NPAS1Q99742 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
NPAS1Q99742 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
NPAS1Q99742 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
NPAS1Q99742 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
NPAS1Q99742 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
NPAS1Q99742 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms