Protein–RNA interactions for Protein: Q99643

SDHC, Succinate dehydrogenase cytochrome b560 subunit, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDHCQ99643 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
SDHCQ99643 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
SDHCQ99643 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SDHCQ99643 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC17.59■□□□□ 0.41
SDHCQ99643 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SDHCQ99643 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
SDHCQ99643 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
SDHCQ99643 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
SDHCQ99643 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
SDHCQ99643 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC17.59■□□□□ 0.41
SDHCQ99643 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SDHCQ99643 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC17.59■□□□□ 0.41
SDHCQ99643 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC17.59■□□□□ 0.41
SDHCQ99643 AC104581.1-202ENST00000635932 2618 ntBASIC17.59■□□□□ 0.41
SDHCQ99643 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SDHCQ99643 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
SDHCQ99643 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC17.59■□□□□ 0.41
SDHCQ99643 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC17.59■□□□□ 0.41
SDHCQ99643 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
SDHCQ99643 STK25-205ENST00000405883 1904 ntTSL 2 BASIC17.59■□□□□ 0.41
SDHCQ99643 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
SDHCQ99643 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC17.58■□□□□ 0.41
SDHCQ99643 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
SDHCQ99643 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
SDHCQ99643 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC17.58■□□□□ 0.41
SDHCQ99643 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC17.58■□□□□ 0.4
SDHCQ99643 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC17.58■□□□□ 0.4
SDHCQ99643 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
SDHCQ99643 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC17.58■□□□□ 0.4
SDHCQ99643 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC17.58■□□□□ 0.4
SDHCQ99643 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
SDHCQ99643 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
SDHCQ99643 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
SDHCQ99643 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
SDHCQ99643 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
SDHCQ99643 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
SDHCQ99643 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SDHCQ99643 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
SDHCQ99643 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
SDHCQ99643 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC17.58■□□□□ 0.4
SDHCQ99643 AC009113.1-201ENST00000570267 2443 ntBASIC17.58■□□□□ 0.4
SDHCQ99643 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SDHCQ99643 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC17.58■□□□□ 0.4
SDHCQ99643 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
SDHCQ99643 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SDHCQ99643 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SDHCQ99643 AC018470.1-201ENST00000624790 3129 ntBASIC17.57■□□□□ 0.4
SDHCQ99643 CROCCP3-202ENST00000420820 1947 ntBASIC17.57■□□□□ 0.4
SDHCQ99643 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC17.57■□□□□ 0.4
SDHCQ99643 BEX3-202ENST00000372634 753 ntTSL 2 BASIC17.57■□□□□ 0.4
SDHCQ99643 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SDHCQ99643 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC17.57■□□□□ 0.4
SDHCQ99643 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC17.57■□□□□ 0.4
SDHCQ99643 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SDHCQ99643 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
SDHCQ99643 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
SDHCQ99643 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SDHCQ99643 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SDHCQ99643 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC17.56■□□□□ 0.4
SDHCQ99643 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SDHCQ99643 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SDHCQ99643 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC17.56■□□□□ 0.4
SDHCQ99643 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
SDHCQ99643 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC17.56■□□□□ 0.4
SDHCQ99643 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
SDHCQ99643 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
SDHCQ99643 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC17.56■□□□□ 0.4
SDHCQ99643 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC17.56■□□□□ 0.4
SDHCQ99643 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SDHCQ99643 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC17.56■□□□□ 0.4
SDHCQ99643 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SDHCQ99643 AL390961.4-201ENST00000623958 2535 ntBASIC17.56■□□□□ 0.4
SDHCQ99643 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC17.56■□□□□ 0.4
SDHCQ99643 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SDHCQ99643 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC17.56■□□□□ 0.4
SDHCQ99643 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SDHCQ99643 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC17.55■□□□□ 0.4
SDHCQ99643 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC17.55■□□□□ 0.4
SDHCQ99643 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SDHCQ99643 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SDHCQ99643 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
SDHCQ99643 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SDHCQ99643 STAC-204ENST00000457375 1366 ntTSL 2 BASIC17.55■□□□□ 0.4
SDHCQ99643 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
SDHCQ99643 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SDHCQ99643 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SDHCQ99643 LINC01465-201ENST00000408887 1940 ntBASIC17.55■□□□□ 0.4
SDHCQ99643 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
SDHCQ99643 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SDHCQ99643 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SDHCQ99643 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SDHCQ99643 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SDHCQ99643 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC17.55■□□□□ 0.4
SDHCQ99643 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SDHCQ99643 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SDHCQ99643 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC17.55■□□□□ 0.4
SDHCQ99643 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC17.55■□□□□ 0.4
SDHCQ99643 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC17.55■□□□□ 0.4
SDHCQ99643 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC17.55■□□□□ 0.4
SDHCQ99643 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms