Protein–RNA interactions for Protein: Q96RK4

BBS4, Bardet-Biedl syndrome 4 protein, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4Q96RK4 WWOX-218ENST00000627394 894 ntTSL 5 BASIC19.28■□□□□ 0.68
BBS4Q96RK4 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
BBS4Q96RK4 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
BBS4Q96RK4 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
BBS4Q96RK4 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
BBS4Q96RK4 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC19.28■□□□□ 0.68
BBS4Q96RK4 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
BBS4Q96RK4 AC020907.5-201ENST00000624372 1936 ntBASIC19.27■□□□□ 0.68
BBS4Q96RK4 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC19.27■□□□□ 0.68
BBS4Q96RK4 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
BBS4Q96RK4 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC19.27■□□□□ 0.68
BBS4Q96RK4 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
BBS4Q96RK4 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
BBS4Q96RK4 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
BBS4Q96RK4 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
BBS4Q96RK4 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
BBS4Q96RK4 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
BBS4Q96RK4 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
BBS4Q96RK4 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
BBS4Q96RK4 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
BBS4Q96RK4 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
BBS4Q96RK4 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC19.27■□□□□ 0.68
BBS4Q96RK4 SAPCD2P1-201ENST00000395413 1184 ntBASIC19.27■□□□□ 0.68
BBS4Q96RK4 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
BBS4Q96RK4 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
BBS4Q96RK4 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC19.27■□□□□ 0.68
BBS4Q96RK4 MIR2861-201ENST00000636310 90 ntBASIC19.27■□□□□ 0.68
BBS4Q96RK4 AC013268.1-206ENST00000638368 961 ntBASIC19.27■□□□□ 0.68
BBS4Q96RK4 AC112229.1-201ENST00000639295 961 ntBASIC19.27■□□□□ 0.68
BBS4Q96RK4 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
BBS4Q96RK4 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
BBS4Q96RK4 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
BBS4Q96RK4 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC19.27■□□□□ 0.67
BBS4Q96RK4 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
BBS4Q96RK4 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
BBS4Q96RK4 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
BBS4Q96RK4 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
BBS4Q96RK4 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC19.26■□□□□ 0.67
BBS4Q96RK4 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
BBS4Q96RK4 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC19.26■□□□□ 0.67
BBS4Q96RK4 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
BBS4Q96RK4 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC19.26■□□□□ 0.67
BBS4Q96RK4 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
BBS4Q96RK4 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC19.26■□□□□ 0.67
BBS4Q96RK4 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC19.26■□□□□ 0.67
BBS4Q96RK4 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
BBS4Q96RK4 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC19.26■□□□□ 0.67
BBS4Q96RK4 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
BBS4Q96RK4 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC19.26■□□□□ 0.67
BBS4Q96RK4 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
BBS4Q96RK4 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
BBS4Q96RK4 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC19.26■□□□□ 0.67
BBS4Q96RK4 AL121603.2-201ENST00000557373 2117 ntBASIC19.26■□□□□ 0.67
BBS4Q96RK4 MFSD11-216ENST00000590393 1141 ntBASIC19.26■□□□□ 0.67
BBS4Q96RK4 FAM21FP-204ENST00000608637 956 ntBASIC19.26■□□□□ 0.67
BBS4Q96RK4 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC19.26■□□□□ 0.67
BBS4Q96RK4 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
BBS4Q96RK4 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC19.26■□□□□ 0.67
BBS4Q96RK4 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
BBS4Q96RK4 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC19.25■□□□□ 0.67
BBS4Q96RK4 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
BBS4Q96RK4 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
BBS4Q96RK4 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC19.25■□□□□ 0.67
BBS4Q96RK4 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC19.25■□□□□ 0.67
BBS4Q96RK4 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
BBS4Q96RK4 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC19.25■□□□□ 0.67
BBS4Q96RK4 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
BBS4Q96RK4 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC19.25■□□□□ 0.67
BBS4Q96RK4 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC19.25■□□□□ 0.67
BBS4Q96RK4 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
BBS4Q96RK4 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC19.25■□□□□ 0.67
BBS4Q96RK4 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC19.25■□□□□ 0.67
BBS4Q96RK4 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
BBS4Q96RK4 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
BBS4Q96RK4 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
BBS4Q96RK4 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
BBS4Q96RK4 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
BBS4Q96RK4 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC19.25■□□□□ 0.67
BBS4Q96RK4 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC19.25■□□□□ 0.67
BBS4Q96RK4 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC19.25■□□□□ 0.67
BBS4Q96RK4 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC19.25■□□□□ 0.67
BBS4Q96RK4 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
BBS4Q96RK4 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
BBS4Q96RK4 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
BBS4Q96RK4 AC092720.2-201ENST00000602388 1665 ntBASIC19.24■□□□□ 0.67
BBS4Q96RK4 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC19.24■□□□□ 0.67
BBS4Q96RK4 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
BBS4Q96RK4 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
BBS4Q96RK4 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
BBS4Q96RK4 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC19.24■□□□□ 0.67
BBS4Q96RK4 MIR935-201ENST00000401179 91 ntBASIC19.24■□□□□ 0.67
BBS4Q96RK4 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC19.24■□□□□ 0.67
BBS4Q96RK4 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC19.24■□□□□ 0.67
BBS4Q96RK4 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
BBS4Q96RK4 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
BBS4Q96RK4 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
BBS4Q96RK4 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
BBS4Q96RK4 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
BBS4Q96RK4 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
BBS4Q96RK4 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC19.24■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 17.4 ms