Protein–RNA interactions for Protein: Q96N23

CFAP54, Cilia- and flagella-associated protein 54, humanhuman

Predictions only

Length 3,096 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP54Q96N23 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC20.13■□□□□ 0.81
CFAP54Q96N23 ATP5G1P1-201ENST00000448724 379 ntBASIC20.13■□□□□ 0.81
CFAP54Q96N23 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CFAP54Q96N23 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC20.12■□□□□ 0.81
CFAP54Q96N23 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
CFAP54Q96N23 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
CFAP54Q96N23 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CFAP54Q96N23 FDX2-207ENST00000494368 584 ntTSL 4 BASIC20.12■□□□□ 0.81
CFAP54Q96N23 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC20.12■□□□□ 0.81
CFAP54Q96N23 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC20.12■□□□□ 0.81
CFAP54Q96N23 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC20.12■□□□□ 0.81
CFAP54Q96N23 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CFAP54Q96N23 AC087742.1-201ENST00000575880 1738 ntBASIC20.12■□□□□ 0.81
CFAP54Q96N23 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CFAP54Q96N23 VMO1-204ENST00000441199 741 ntTSL 2 BASIC20.12■□□□□ 0.81
CFAP54Q96N23 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC20.12■□□□□ 0.81
CFAP54Q96N23 LINC01238-205ENST00000567549 1107 ntBASIC20.12■□□□□ 0.81
CFAP54Q96N23 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
CFAP54Q96N23 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC20.12■□□□□ 0.81
CFAP54Q96N23 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC20.12■□□□□ 0.81
CFAP54Q96N23 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC20.12■□□□□ 0.81
CFAP54Q96N23 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CFAP54Q96N23 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
CFAP54Q96N23 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CFAP54Q96N23 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC20.11■□□□□ 0.81
CFAP54Q96N23 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
CFAP54Q96N23 AC139530.3-201ENST00000620344 690 ntBASIC20.11■□□□□ 0.81
CFAP54Q96N23 AC093458.2-201ENST00000623150 629 ntBASIC20.11■□□□□ 0.81
CFAP54Q96N23 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC20.11■□□□□ 0.81
CFAP54Q96N23 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CFAP54Q96N23 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC20.11■□□□□ 0.81
CFAP54Q96N23 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
CFAP54Q96N23 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CFAP54Q96N23 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC20.11■□□□□ 0.81
CFAP54Q96N23 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC20.11■□□□□ 0.81
CFAP54Q96N23 C1orf229-201ENST00000623686 2258 ntBASIC20.11■□□□□ 0.81
CFAP54Q96N23 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CFAP54Q96N23 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CFAP54Q96N23 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CFAP54Q96N23 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC20.1■□□□□ 0.81
CFAP54Q96N23 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CFAP54Q96N23 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC20.1■□□□□ 0.81
CFAP54Q96N23 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
CFAP54Q96N23 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CFAP54Q96N23 ME2-208ENST00000638937 2471 ntTSL 5 BASIC20.1■□□□□ 0.81
CFAP54Q96N23 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
CFAP54Q96N23 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC20.1■□□□□ 0.81
CFAP54Q96N23 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CFAP54Q96N23 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC20.1■□□□□ 0.81
CFAP54Q96N23 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
CFAP54Q96N23 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CFAP54Q96N23 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CFAP54Q96N23 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CFAP54Q96N23 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CFAP54Q96N23 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CFAP54Q96N23 AC003102.1-202ENST00000563394 1796 ntBASIC20.1■□□□□ 0.81
CFAP54Q96N23 SAPCD2P2-201ENST00000431719 1174 ntBASIC20.09■□□□□ 0.81
CFAP54Q96N23 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC20.09■□□□□ 0.81
CFAP54Q96N23 AC010203.1-204ENST00000548782 407 ntBASIC20.09■□□□□ 0.81
CFAP54Q96N23 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CFAP54Q96N23 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CFAP54Q96N23 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
CFAP54Q96N23 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CFAP54Q96N23 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CFAP54Q96N23 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC20.09■□□□□ 0.81
CFAP54Q96N23 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CFAP54Q96N23 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CFAP54Q96N23 AC073195.1-201ENST00000607241 877 ntBASIC20.09■□□□□ 0.81
CFAP54Q96N23 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
CFAP54Q96N23 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC20.09■□□□□ 0.81
CFAP54Q96N23 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CFAP54Q96N23 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CFAP54Q96N23 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC20.08■□□□□ 0.81
CFAP54Q96N23 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
CFAP54Q96N23 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CFAP54Q96N23 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC20.08■□□□□ 0.81
CFAP54Q96N23 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
CFAP54Q96N23 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
CFAP54Q96N23 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC20.08■□□□□ 0.81
CFAP54Q96N23 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
CFAP54Q96N23 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC20.08■□□□□ 0.81
CFAP54Q96N23 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
CFAP54Q96N23 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CFAP54Q96N23 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC20.08■□□□□ 0.81
CFAP54Q96N23 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC20.08■□□□□ 0.81
CFAP54Q96N23 KLK8-205ENST00000593490 267 ntTSL 3 BASIC20.08■□□□□ 0.81
CFAP54Q96N23 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
CFAP54Q96N23 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
CFAP54Q96N23 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
CFAP54Q96N23 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC20.08■□□□□ 0.8
CFAP54Q96N23 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
CFAP54Q96N23 NAPSB-206ENST00000562112 1266 ntBASIC20.08■□□□□ 0.8
CFAP54Q96N23 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC20.08■□□□□ 0.8
CFAP54Q96N23 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CFAP54Q96N23 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
CFAP54Q96N23 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CFAP54Q96N23 LIN28AP1-201ENST00000429574 405 ntBASIC20.07■□□□□ 0.8
CFAP54Q96N23 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC20.07■□□□□ 0.8
CFAP54Q96N23 FAM207BP-201ENST00000447172 505 ntBASIC20.07■□□□□ 0.8
CFAP54Q96N23 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms