Protein–RNA interactions for Protein: Q96MX0

CMTM3, CKLF-like MARVEL transmembrane domain-containing protein 3, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3Q96MX0 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
CMTM3Q96MX0 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
CMTM3Q96MX0 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CMTM3Q96MX0 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CMTM3Q96MX0 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
CMTM3Q96MX0 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
CMTM3Q96MX0 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC17.5■□□□□ 0.39
CMTM3Q96MX0 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CMTM3Q96MX0 UNC93B8-201ENST00000511903 705 ntBASIC17.5■□□□□ 0.39
CMTM3Q96MX0 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CMTM3Q96MX0 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC17.5■□□□□ 0.39
CMTM3Q96MX0 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CMTM3Q96MX0 TREX1-205ENST00000625293 1783 ntBASIC17.5■□□□□ 0.39
CMTM3Q96MX0 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
CMTM3Q96MX0 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC17.5■□□□□ 0.39
CMTM3Q96MX0 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
CMTM3Q96MX0 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
CMTM3Q96MX0 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC17.5■□□□□ 0.39
CMTM3Q96MX0 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
CMTM3Q96MX0 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CMTM3Q96MX0 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CMTM3Q96MX0 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CMTM3Q96MX0 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC17.49■□□□□ 0.39
CMTM3Q96MX0 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
CMTM3Q96MX0 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
CMTM3Q96MX0 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CMTM3Q96MX0 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC17.49■□□□□ 0.39
CMTM3Q96MX0 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CMTM3Q96MX0 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
CMTM3Q96MX0 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
CMTM3Q96MX0 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
CMTM3Q96MX0 AC133561.4-201ENST00000566112 224 ntBASIC17.49■□□□□ 0.39
CMTM3Q96MX0 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC17.49■□□□□ 0.39
CMTM3Q96MX0 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC17.49■□□□□ 0.39
CMTM3Q96MX0 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
CMTM3Q96MX0 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC17.49■□□□□ 0.39
CMTM3Q96MX0 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC17.49■□□□□ 0.39
CMTM3Q96MX0 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC17.48■□□□□ 0.39
CMTM3Q96MX0 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC17.48■□□□□ 0.39
CMTM3Q96MX0 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CMTM3Q96MX0 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CMTM3Q96MX0 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
CMTM3Q96MX0 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CMTM3Q96MX0 SNX3-202ENST00000349379 890 ntTSL 2 BASIC17.48■□□□□ 0.39
CMTM3Q96MX0 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CMTM3Q96MX0 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
CMTM3Q96MX0 AC053503.5-201ENST00000601508 636 ntBASIC17.48■□□□□ 0.39
CMTM3Q96MX0 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CMTM3Q96MX0 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
CMTM3Q96MX0 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CMTM3Q96MX0 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC17.48■□□□□ 0.39
CMTM3Q96MX0 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
CMTM3Q96MX0 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CMTM3Q96MX0 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC17.48■□□□□ 0.39
CMTM3Q96MX0 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CMTM3Q96MX0 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CMTM3Q96MX0 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC17.47■□□□□ 0.39
CMTM3Q96MX0 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CMTM3Q96MX0 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CMTM3Q96MX0 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CMTM3Q96MX0 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
CMTM3Q96MX0 SERBP1P1-201ENST00000396021 1160 ntBASIC17.47■□□□□ 0.39
CMTM3Q96MX0 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
CMTM3Q96MX0 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC17.47■□□□□ 0.39
CMTM3Q96MX0 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC17.47■□□□□ 0.39
CMTM3Q96MX0 EEF1DP3-203ENST00000566025 782 ntBASIC17.47■□□□□ 0.39
CMTM3Q96MX0 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC17.47■□□□□ 0.39
CMTM3Q96MX0 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC17.47■□□□□ 0.39
CMTM3Q96MX0 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC17.47■□□□□ 0.39
CMTM3Q96MX0 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CMTM3Q96MX0 AC005224.4-201ENST00000583262 1652 ntBASIC17.47■□□□□ 0.39
CMTM3Q96MX0 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC17.47■□□□□ 0.39
CMTM3Q96MX0 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC17.47■□□□□ 0.39
CMTM3Q96MX0 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CMTM3Q96MX0 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
CMTM3Q96MX0 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
CMTM3Q96MX0 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CMTM3Q96MX0 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
CMTM3Q96MX0 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CMTM3Q96MX0 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CMTM3Q96MX0 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC17.47■□□□□ 0.39
CMTM3Q96MX0 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CMTM3Q96MX0 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CMTM3Q96MX0 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
CMTM3Q96MX0 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CMTM3Q96MX0 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CMTM3Q96MX0 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC17.46■□□□□ 0.39
CMTM3Q96MX0 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
CMTM3Q96MX0 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC17.46■□□□□ 0.39
CMTM3Q96MX0 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
CMTM3Q96MX0 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC17.46■□□□□ 0.39
CMTM3Q96MX0 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC17.46■□□□□ 0.39
CMTM3Q96MX0 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CMTM3Q96MX0 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CMTM3Q96MX0 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CMTM3Q96MX0 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CMTM3Q96MX0 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC17.46■□□□□ 0.38
CMTM3Q96MX0 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CMTM3Q96MX0 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CMTM3Q96MX0 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms