Protein–RNA interactions for Protein: Q96JI7

SPG11, Spatacsin, humanhuman

Predictions only

Length 2,443 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11Q96JI7 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SPG11Q96JI7 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SPG11Q96JI7 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SPG11Q96JI7 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
SPG11Q96JI7 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SPG11Q96JI7 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SPG11Q96JI7 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SPG11Q96JI7 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SPG11Q96JI7 AL353807.1-201ENST00000427475 662 ntBASIC17.34■□□□□ 0.37
SPG11Q96JI7 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
SPG11Q96JI7 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC17.34■□□□□ 0.37
SPG11Q96JI7 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC17.34■□□□□ 0.37
SPG11Q96JI7 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SPG11Q96JI7 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC17.34■□□□□ 0.37
SPG11Q96JI7 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SPG11Q96JI7 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
SPG11Q96JI7 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
SPG11Q96JI7 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SPG11Q96JI7 NBPF21P-201ENST00000425093 1451 ntBASIC17.34■□□□□ 0.37
SPG11Q96JI7 AC080038.3-201ENST00000623346 1952 ntBASIC17.34■□□□□ 0.37
SPG11Q96JI7 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SPG11Q96JI7 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SPG11Q96JI7 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SPG11Q96JI7 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SPG11Q96JI7 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SPG11Q96JI7 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SPG11Q96JI7 AC116050.2-201ENST00000612102 1779 ntBASIC17.34■□□□□ 0.37
SPG11Q96JI7 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
SPG11Q96JI7 FAM197Y1-201ENST00000421178 764 ntBASIC17.33■□□□□ 0.37
SPG11Q96JI7 RBM17P1-201ENST00000453646 1190 ntBASIC17.33■□□□□ 0.37
SPG11Q96JI7 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC17.33■□□□□ 0.37
SPG11Q96JI7 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC17.33■□□□□ 0.37
SPG11Q96JI7 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC17.33■□□□□ 0.37
SPG11Q96JI7 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC17.33■□□□□ 0.37
SPG11Q96JI7 CASK-201ENST00000378154 2494 ntTSL 5 BASIC17.33■□□□□ 0.37
SPG11Q96JI7 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
SPG11Q96JI7 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
SPG11Q96JI7 MMP23A-201ENST00000234610 1017 ntBASIC17.33■□□□□ 0.36
SPG11Q96JI7 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
SPG11Q96JI7 PTPA-214ENST00000423100 988 ntTSL 2 BASIC17.33■□□□□ 0.36
SPG11Q96JI7 AL031963.3-201ENST00000606441 850 ntBASIC17.33■□□□□ 0.36
SPG11Q96JI7 CYP2D8P-201ENST00000433633 1490 ntBASIC17.33■□□□□ 0.36
SPG11Q96JI7 AC079598.2-202ENST00000546624 1451 ntBASIC17.33■□□□□ 0.36
SPG11Q96JI7 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
SPG11Q96JI7 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
SPG11Q96JI7 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
SPG11Q96JI7 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC17.33■□□□□ 0.36
SPG11Q96JI7 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC17.33■□□□□ 0.36
SPG11Q96JI7 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SPG11Q96JI7 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC17.32■□□□□ 0.36
SPG11Q96JI7 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SPG11Q96JI7 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC17.32■□□□□ 0.36
SPG11Q96JI7 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SPG11Q96JI7 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC17.32■□□□□ 0.36
SPG11Q96JI7 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC17.32■□□□□ 0.36
SPG11Q96JI7 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC17.32■□□□□ 0.36
SPG11Q96JI7 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC17.32■□□□□ 0.36
SPG11Q96JI7 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC17.32■□□□□ 0.36
SPG11Q96JI7 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SPG11Q96JI7 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SPG11Q96JI7 CYP21A1P-202ENST00000354927 1481 ntBASIC17.32■□□□□ 0.36
SPG11Q96JI7 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SPG11Q96JI7 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
SPG11Q96JI7 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
SPG11Q96JI7 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SPG11Q96JI7 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SPG11Q96JI7 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC17.32■□□□□ 0.36
SPG11Q96JI7 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC17.32■□□□□ 0.36
SPG11Q96JI7 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SPG11Q96JI7 STX5-203ENST00000394690 1568 ntTSL 5 BASIC17.32■□□□□ 0.36
SPG11Q96JI7 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SPG11Q96JI7 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SPG11Q96JI7 LINC01568-207ENST00000641790 1380 ntBASIC17.32■□□□□ 0.36
SPG11Q96JI7 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
SPG11Q96JI7 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SPG11Q96JI7 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SPG11Q96JI7 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
SPG11Q96JI7 C1orf229-201ENST00000623686 2258 ntBASIC17.31■□□□□ 0.36
SPG11Q96JI7 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
SPG11Q96JI7 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SPG11Q96JI7 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SPG11Q96JI7 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC17.31■□□□□ 0.36
SPG11Q96JI7 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SPG11Q96JI7 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC17.31■□□□□ 0.36
SPG11Q96JI7 REXO1L10P-201ENST00000615707 1290 ntBASIC17.31■□□□□ 0.36
SPG11Q96JI7 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC17.31■□□□□ 0.36
SPG11Q96JI7 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC17.31■□□□□ 0.36
SPG11Q96JI7 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SPG11Q96JI7 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC17.31■□□□□ 0.36
SPG11Q96JI7 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC17.31■□□□□ 0.36
SPG11Q96JI7 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC17.31■□□□□ 0.36
SPG11Q96JI7 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SPG11Q96JI7 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
SPG11Q96JI7 AC005363.2-201ENST00000618631 242 ntBASIC17.31■□□□□ 0.36
SPG11Q96JI7 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC17.31■□□□□ 0.36
SPG11Q96JI7 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
SPG11Q96JI7 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
SPG11Q96JI7 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SPG11Q96JI7 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SPG11Q96JI7 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms