Protein–RNA interactions for Protein: Q96FT9

IFT43, Intraflagellar transport protein 43 homolog, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43Q96FT9 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
IFT43Q96FT9 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
IFT43Q96FT9 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
IFT43Q96FT9 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
IFT43Q96FT9 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC20.9■□□□□ 0.94
IFT43Q96FT9 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
IFT43Q96FT9 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
IFT43Q96FT9 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC20.9■□□□□ 0.94
IFT43Q96FT9 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
IFT43Q96FT9 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC20.9■□□□□ 0.94
IFT43Q96FT9 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
IFT43Q96FT9 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
IFT43Q96FT9 BMP1-204ENST00000397814 836 ntTSL 4 BASIC20.9■□□□□ 0.94
IFT43Q96FT9 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
IFT43Q96FT9 APTR-203ENST00000430801 583 ntTSL 5 BASIC20.9■□□□□ 0.94
IFT43Q96FT9 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC20.9■□□□□ 0.94
IFT43Q96FT9 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
IFT43Q96FT9 AF201337.1-201ENST00000520239 748 ntBASIC20.9■□□□□ 0.94
IFT43Q96FT9 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC20.9■□□□□ 0.94
IFT43Q96FT9 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC20.9■□□□□ 0.94
IFT43Q96FT9 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
IFT43Q96FT9 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC20.9■□□□□ 0.94
IFT43Q96FT9 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
IFT43Q96FT9 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC20.9■□□□□ 0.94
IFT43Q96FT9 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC20.9■□□□□ 0.94
IFT43Q96FT9 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
IFT43Q96FT9 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC20.89■□□□□ 0.94
IFT43Q96FT9 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
IFT43Q96FT9 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
IFT43Q96FT9 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
IFT43Q96FT9 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
IFT43Q96FT9 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
IFT43Q96FT9 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
IFT43Q96FT9 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
IFT43Q96FT9 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC20.89■□□□□ 0.93
IFT43Q96FT9 PTPA-214ENST00000423100 988 ntTSL 2 BASIC20.89■□□□□ 0.93
IFT43Q96FT9 AC073210.2-201ENST00000430369 194 ntBASIC20.89■□□□□ 0.93
IFT43Q96FT9 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
IFT43Q96FT9 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC20.89■□□□□ 0.93
IFT43Q96FT9 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
IFT43Q96FT9 PFKL-212ENST00000628044 129 ntTSL 3 BASIC20.89■□□□□ 0.93
IFT43Q96FT9 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
IFT43Q96FT9 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
IFT43Q96FT9 AL157384.1-201ENST00000445995 2473 ntBASIC20.89■□□□□ 0.93
IFT43Q96FT9 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
IFT43Q96FT9 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
IFT43Q96FT9 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
IFT43Q96FT9 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
IFT43Q96FT9 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC20.88■□□□□ 0.93
IFT43Q96FT9 AC011484.1-201ENST00000377652 1995 ntBASIC20.88■□□□□ 0.93
IFT43Q96FT9 PLK5-205ENST00000642079 1969 ntBASIC20.88■□□□□ 0.93
IFT43Q96FT9 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC20.88■□□□□ 0.93
IFT43Q96FT9 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
IFT43Q96FT9 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC20.88■□□□□ 0.93
IFT43Q96FT9 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
IFT43Q96FT9 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
IFT43Q96FT9 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
IFT43Q96FT9 AC116050.2-201ENST00000612102 1779 ntBASIC20.88■□□□□ 0.93
IFT43Q96FT9 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
IFT43Q96FT9 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
IFT43Q96FT9 RGMA-211ENST00000557420 989 ntTSL 3 BASIC20.88■□□□□ 0.93
IFT43Q96FT9 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC20.88■□□□□ 0.93
IFT43Q96FT9 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
IFT43Q96FT9 LINC01521-201ENST00000504184 1943 ntBASIC20.88■□□□□ 0.93
IFT43Q96FT9 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
IFT43Q96FT9 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
IFT43Q96FT9 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
IFT43Q96FT9 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
IFT43Q96FT9 AC006128.1-201ENST00000624704 1661 ntBASIC20.87■□□□□ 0.93
IFT43Q96FT9 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
IFT43Q96FT9 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC20.87■□□□□ 0.93
IFT43Q96FT9 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC20.87■□□□□ 0.93
IFT43Q96FT9 BET1L-204ENST00000410108 637 ntTSL 3 BASIC20.87■□□□□ 0.93
IFT43Q96FT9 AC091799.1-201ENST00000422823 811 ntBASIC20.87■□□□□ 0.93
IFT43Q96FT9 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
IFT43Q96FT9 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC20.87■□□□□ 0.93
IFT43Q96FT9 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
IFT43Q96FT9 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC20.87■□□□□ 0.93
IFT43Q96FT9 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC20.87■□□□□ 0.93
IFT43Q96FT9 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
IFT43Q96FT9 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
IFT43Q96FT9 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
IFT43Q96FT9 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC20.87■□□□□ 0.93
IFT43Q96FT9 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC20.87■□□□□ 0.93
IFT43Q96FT9 ERF-202ENST00000440177 2032 ntTSL 2 BASIC20.87■□□□□ 0.93
IFT43Q96FT9 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC20.87■□□□□ 0.93
IFT43Q96FT9 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
IFT43Q96FT9 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC20.87■□□□□ 0.93
IFT43Q96FT9 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
IFT43Q96FT9 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC20.86■□□□□ 0.93
IFT43Q96FT9 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
IFT43Q96FT9 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
IFT43Q96FT9 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC20.86■□□□□ 0.93
IFT43Q96FT9 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC20.86■□□□□ 0.93
IFT43Q96FT9 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
IFT43Q96FT9 APTR-205ENST00000447009 902 ntTSL 2 BASIC20.86■□□□□ 0.93
IFT43Q96FT9 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC20.86■□□□□ 0.93
IFT43Q96FT9 CD44-222ENST00000526025 1052 ntTSL 2 BASIC20.86■□□□□ 0.93
IFT43Q96FT9 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC20.86■□□□□ 0.93
IFT43Q96FT9 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC20.86■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 18.6 ms