Protein–RNA interactions for Protein: Q96FL8

SLC47A1, Multidrug and toxin extrusion protein 1, humanhuman

Predictions only

Length 570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC47A1Q96FL8 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC19.17■□□□□ 0.66
SLC47A1Q96FL8 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SLC47A1Q96FL8 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC19.17■□□□□ 0.66
SLC47A1Q96FL8 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
SLC47A1Q96FL8 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
SLC47A1Q96FL8 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
SLC47A1Q96FL8 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC19.16■□□□□ 0.66
SLC47A1Q96FL8 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
SLC47A1Q96FL8 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
SLC47A1Q96FL8 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
SLC47A1Q96FL8 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SLC47A1Q96FL8 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC19.16■□□□□ 0.66
SLC47A1Q96FL8 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SLC47A1Q96FL8 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
SLC47A1Q96FL8 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SLC47A1Q96FL8 HYI-206ENST00000372434 1025 ntTSL 5 BASIC19.16■□□□□ 0.66
SLC47A1Q96FL8 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC19.16■□□□□ 0.66
SLC47A1Q96FL8 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC19.16■□□□□ 0.66
SLC47A1Q96FL8 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC19.16■□□□□ 0.66
SLC47A1Q96FL8 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC19.16■□□□□ 0.66
SLC47A1Q96FL8 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SLC47A1Q96FL8 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
SLC47A1Q96FL8 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC19.16■□□□□ 0.66
SLC47A1Q96FL8 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SLC47A1Q96FL8 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SLC47A1Q96FL8 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SLC47A1Q96FL8 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SLC47A1Q96FL8 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SLC47A1Q96FL8 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC19.16■□□□□ 0.66
SLC47A1Q96FL8 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC19.15■□□□□ 0.66
SLC47A1Q96FL8 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SLC47A1Q96FL8 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
SLC47A1Q96FL8 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
SLC47A1Q96FL8 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SLC47A1Q96FL8 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SLC47A1Q96FL8 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SLC47A1Q96FL8 RHOF-204ENST00000537265 699 ntTSL 2 BASIC19.15■□□□□ 0.66
SLC47A1Q96FL8 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SLC47A1Q96FL8 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SLC47A1Q96FL8 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC19.15■□□□□ 0.66
SLC47A1Q96FL8 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SLC47A1Q96FL8 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC19.15■□□□□ 0.66
SLC47A1Q96FL8 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC19.15■□□□□ 0.66
SLC47A1Q96FL8 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC19.15■□□□□ 0.66
SLC47A1Q96FL8 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
SLC47A1Q96FL8 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.66
SLC47A1Q96FL8 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
SLC47A1Q96FL8 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC19.14■□□□□ 0.66
SLC47A1Q96FL8 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC19.14■□□□□ 0.65
SLC47A1Q96FL8 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SLC47A1Q96FL8 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SLC47A1Q96FL8 NME4-202ENST00000382940 766 ntTSL 3 BASIC19.14■□□□□ 0.65
SLC47A1Q96FL8 NT5C3AP1-201ENST00000394500 1012 ntBASIC19.14■□□□□ 0.65
SLC47A1Q96FL8 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
SLC47A1Q96FL8 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC19.14■□□□□ 0.65
SLC47A1Q96FL8 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
SLC47A1Q96FL8 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
SLC47A1Q96FL8 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC19.14■□□□□ 0.65
SLC47A1Q96FL8 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC19.14■□□□□ 0.65
SLC47A1Q96FL8 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
SLC47A1Q96FL8 NME4-211ENST00000620944 1193 ntTSL 2 BASIC19.14■□□□□ 0.65
SLC47A1Q96FL8 AP004607.4-201ENST00000530158 1459 ntBASIC19.14■□□□□ 0.65
SLC47A1Q96FL8 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC19.14■□□□□ 0.65
SLC47A1Q96FL8 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SLC47A1Q96FL8 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC19.14■□□□□ 0.65
SLC47A1Q96FL8 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC19.14■□□□□ 0.65
SLC47A1Q96FL8 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC19.14■□□□□ 0.65
SLC47A1Q96FL8 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
SLC47A1Q96FL8 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC19.13■□□□□ 0.65
SLC47A1Q96FL8 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC19.13■□□□□ 0.65
SLC47A1Q96FL8 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SLC47A1Q96FL8 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SLC47A1Q96FL8 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
SLC47A1Q96FL8 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SLC47A1Q96FL8 IRS3P-201ENST00000223076 1006 ntBASIC19.13■□□□□ 0.65
SLC47A1Q96FL8 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC19.13■□□□□ 0.65
SLC47A1Q96FL8 MTURN-203ENST00000409688 843 ntTSL 2 BASIC19.13■□□□□ 0.65
SLC47A1Q96FL8 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SLC47A1Q96FL8 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC19.13■□□□□ 0.65
SLC47A1Q96FL8 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
SLC47A1Q96FL8 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC19.13■□□□□ 0.65
SLC47A1Q96FL8 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC19.13■□□□□ 0.65
SLC47A1Q96FL8 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC19.13■□□□□ 0.65
SLC47A1Q96FL8 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC19.13■□□□□ 0.65
SLC47A1Q96FL8 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
SLC47A1Q96FL8 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC19.13■□□□□ 0.65
SLC47A1Q96FL8 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
SLC47A1Q96FL8 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
SLC47A1Q96FL8 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC19.13■□□□□ 0.65
SLC47A1Q96FL8 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC19.13■□□□□ 0.65
SLC47A1Q96FL8 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SLC47A1Q96FL8 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SLC47A1Q96FL8 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
SLC47A1Q96FL8 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
SLC47A1Q96FL8 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SLC47A1Q96FL8 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC19.12■□□□□ 0.65
SLC47A1Q96FL8 TPRG1LP1-201ENST00000598702 760 ntBASIC19.12■□□□□ 0.65
SLC47A1Q96FL8 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC19.12■□□□□ 0.65
SLC47A1Q96FL8 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC19.12■□□□□ 0.65
SLC47A1Q96FL8 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms