Protein–RNA interactions for Protein: Q96A83

COL26A1, Collagen alpha-1(XXVI) chain, humanhuman

Predictions only

Length 441 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL26A1Q96A83 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
COL26A1Q96A83 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC19.62■□□□□ 0.73
COL26A1Q96A83 USP36-216ENST00000589424 970 ntTSL 5 BASIC19.62■□□□□ 0.73
COL26A1Q96A83 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
COL26A1Q96A83 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC19.62■□□□□ 0.73
COL26A1Q96A83 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
COL26A1Q96A83 AL049796.1-201ENST00000565336 1766 ntBASIC19.62■□□□□ 0.73
COL26A1Q96A83 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC19.62■□□□□ 0.73
COL26A1Q96A83 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC19.61■□□□□ 0.73
COL26A1Q96A83 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
COL26A1Q96A83 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
COL26A1Q96A83 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
COL26A1Q96A83 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
COL26A1Q96A83 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC19.61■□□□□ 0.73
COL26A1Q96A83 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC19.61■□□□□ 0.73
COL26A1Q96A83 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC19.61■□□□□ 0.73
COL26A1Q96A83 AC073210.2-201ENST00000430369 194 ntBASIC19.61■□□□□ 0.73
COL26A1Q96A83 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC19.61■□□□□ 0.73
COL26A1Q96A83 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC19.61■□□□□ 0.73
COL26A1Q96A83 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC19.61■□□□□ 0.73
COL26A1Q96A83 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC19.61■□□□□ 0.73
COL26A1Q96A83 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
COL26A1Q96A83 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC19.61■□□□□ 0.73
COL26A1Q96A83 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
COL26A1Q96A83 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC19.61■□□□□ 0.73
COL26A1Q96A83 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
COL26A1Q96A83 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
COL26A1Q96A83 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
COL26A1Q96A83 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
COL26A1Q96A83 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
COL26A1Q96A83 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
COL26A1Q96A83 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
COL26A1Q96A83 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
COL26A1Q96A83 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC19.6■□□□□ 0.73
COL26A1Q96A83 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
COL26A1Q96A83 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC19.6■□□□□ 0.73
COL26A1Q96A83 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
COL26A1Q96A83 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
COL26A1Q96A83 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
COL26A1Q96A83 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC19.6■□□□□ 0.73
COL26A1Q96A83 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
COL26A1Q96A83 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
COL26A1Q96A83 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
COL26A1Q96A83 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
COL26A1Q96A83 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
COL26A1Q96A83 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
COL26A1Q96A83 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
COL26A1Q96A83 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC19.59■□□□□ 0.73
COL26A1Q96A83 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC19.59■□□□□ 0.73
COL26A1Q96A83 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC19.59■□□□□ 0.73
COL26A1Q96A83 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC19.59■□□□□ 0.73
COL26A1Q96A83 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC19.59■□□□□ 0.73
COL26A1Q96A83 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC19.59■□□□□ 0.73
COL26A1Q96A83 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
COL26A1Q96A83 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
COL26A1Q96A83 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC19.59■□□□□ 0.73
COL26A1Q96A83 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
COL26A1Q96A83 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
COL26A1Q96A83 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
COL26A1Q96A83 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
COL26A1Q96A83 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
COL26A1Q96A83 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
COL26A1Q96A83 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
COL26A1Q96A83 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.73
COL26A1Q96A83 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
COL26A1Q96A83 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
COL26A1Q96A83 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC19.58■□□□□ 0.73
COL26A1Q96A83 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC19.58■□□□□ 0.73
COL26A1Q96A83 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC19.58■□□□□ 0.73
COL26A1Q96A83 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC19.58■□□□□ 0.73
COL26A1Q96A83 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC19.58■□□□□ 0.72
COL26A1Q96A83 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
COL26A1Q96A83 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
COL26A1Q96A83 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC19.58■□□□□ 0.72
COL26A1Q96A83 MIPEPP3-201ENST00000412105 444 ntBASIC19.58■□□□□ 0.72
COL26A1Q96A83 PTPA-214ENST00000423100 988 ntTSL 2 BASIC19.58■□□□□ 0.72
COL26A1Q96A83 FAM21FP-204ENST00000608637 956 ntBASIC19.58■□□□□ 0.72
COL26A1Q96A83 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC19.58■□□□□ 0.72
COL26A1Q96A83 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC19.58■□□□□ 0.72
COL26A1Q96A83 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
COL26A1Q96A83 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC19.57■□□□□ 0.72
COL26A1Q96A83 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
COL26A1Q96A83 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
COL26A1Q96A83 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
COL26A1Q96A83 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
COL26A1Q96A83 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
COL26A1Q96A83 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
COL26A1Q96A83 BX276092.2-201ENST00000417668 665 ntBASIC19.57■□□□□ 0.72
COL26A1Q96A83 AC007322.3-201ENST00000426526 701 ntBASIC19.57■□□□□ 0.72
COL26A1Q96A83 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
COL26A1Q96A83 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC19.57■□□□□ 0.72
COL26A1Q96A83 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC19.57■□□□□ 0.72
COL26A1Q96A83 ISCU-212ENST00000547005 795 ntTSL 3 BASIC19.57■□□□□ 0.72
COL26A1Q96A83 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
COL26A1Q96A83 MIR4758-201ENST00000577688 71 ntBASIC19.57■□□□□ 0.72
COL26A1Q96A83 MIR4497-201ENST00000583208 89 ntBASIC19.57■□□□□ 0.72
COL26A1Q96A83 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC19.57■□□□□ 0.72
COL26A1Q96A83 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
COL26A1Q96A83 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
COL26A1Q96A83 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms