Protein–RNA interactions for Protein: Q93038

TNFRSF25, Tumor necrosis factor receptor superfamily member 25, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF25Q93038 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
TNFRSF25Q93038 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
TNFRSF25Q93038 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC23.24■■□□□ 1.31
TNFRSF25Q93038 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC23.24■■□□□ 1.31
TNFRSF25Q93038 AC105020.6-201ENST00000621523 1217 ntBASIC23.24■■□□□ 1.31
TNFRSF25Q93038 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC23.24■■□□□ 1.31
TNFRSF25Q93038 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC23.24■■□□□ 1.31
TNFRSF25Q93038 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC23.24■■□□□ 1.31
TNFRSF25Q93038 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
TNFRSF25Q93038 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC23.24■■□□□ 1.31
TNFRSF25Q93038 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
TNFRSF25Q93038 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
TNFRSF25Q93038 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC23.23■■□□□ 1.31
TNFRSF25Q93038 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC23.23■■□□□ 1.31
TNFRSF25Q93038 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
TNFRSF25Q93038 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC23.23■■□□□ 1.31
TNFRSF25Q93038 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC23.23■■□□□ 1.31
TNFRSF25Q93038 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
TNFRSF25Q93038 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
TNFRSF25Q93038 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
TNFRSF25Q93038 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC23.23■■□□□ 1.31
TNFRSF25Q93038 PGM5P4-201ENST00000421970 445 ntBASIC23.23■■□□□ 1.31
TNFRSF25Q93038 NCF1B-203ENST00000435988 1254 ntBASIC23.23■■□□□ 1.31
TNFRSF25Q93038 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC23.23■■□□□ 1.31
TNFRSF25Q93038 AF201337.1-201ENST00000520239 748 ntBASIC23.23■■□□□ 1.31
TNFRSF25Q93038 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
TNFRSF25Q93038 AC105036.2-201ENST00000569468 176 ntBASIC23.23■■□□□ 1.31
TNFRSF25Q93038 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC23.23■■□□□ 1.31
TNFRSF25Q93038 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
TNFRSF25Q93038 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC23.23■■□□□ 1.31
TNFRSF25Q93038 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC23.22■■□□□ 1.31
TNFRSF25Q93038 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC23.22■■□□□ 1.31
TNFRSF25Q93038 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC23.22■■□□□ 1.31
TNFRSF25Q93038 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
TNFRSF25Q93038 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC23.22■■□□□ 1.31
TNFRSF25Q93038 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC23.22■■□□□ 1.31
TNFRSF25Q93038 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC23.22■■□□□ 1.31
TNFRSF25Q93038 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
TNFRSF25Q93038 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC23.22■■□□□ 1.31
TNFRSF25Q93038 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
TNFRSF25Q93038 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC23.22■■□□□ 1.31
TNFRSF25Q93038 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC23.21■■□□□ 1.31
TNFRSF25Q93038 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
TNFRSF25Q93038 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC23.21■■□□□ 1.31
TNFRSF25Q93038 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
TNFRSF25Q93038 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC23.21■■□□□ 1.31
TNFRSF25Q93038 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
TNFRSF25Q93038 AC083906.2-201ENST00000511578 360 ntBASIC23.21■■□□□ 1.31
TNFRSF25Q93038 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
TNFRSF25Q93038 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC23.21■■□□□ 1.31
TNFRSF25Q93038 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC23.21■■□□□ 1.31
TNFRSF25Q93038 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC23.21■■□□□ 1.31
TNFRSF25Q93038 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
TNFRSF25Q93038 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC23.21■■□□□ 1.31
TNFRSF25Q93038 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
TNFRSF25Q93038 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
TNFRSF25Q93038 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
TNFRSF25Q93038 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
TNFRSF25Q93038 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC23.2■■□□□ 1.3
TNFRSF25Q93038 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
TNFRSF25Q93038 STK25-205ENST00000405883 1904 ntTSL 2 BASIC23.2■■□□□ 1.3
TNFRSF25Q93038 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
TNFRSF25Q93038 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC23.2■■□□□ 1.3
TNFRSF25Q93038 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC23.2■■□□□ 1.3
TNFRSF25Q93038 AC006970.2-201ENST00000450065 779 ntBASIC23.2■■□□□ 1.3
TNFRSF25Q93038 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC23.2■■□□□ 1.3
TNFRSF25Q93038 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC23.2■■□□□ 1.3
TNFRSF25Q93038 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC23.2■■□□□ 1.3
TNFRSF25Q93038 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC23.2■■□□□ 1.3
TNFRSF25Q93038 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC23.2■■□□□ 1.3
TNFRSF25Q93038 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
TNFRSF25Q93038 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC23.19■■□□□ 1.3
TNFRSF25Q93038 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC23.19■■□□□ 1.3
TNFRSF25Q93038 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
TNFRSF25Q93038 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
TNFRSF25Q93038 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
TNFRSF25Q93038 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC23.19■■□□□ 1.3
TNFRSF25Q93038 AC090192.1-201ENST00000517740 490 ntBASIC23.19■■□□□ 1.3
TNFRSF25Q93038 AL121832.2-201ENST00000610979 668 ntBASIC23.19■■□□□ 1.3
TNFRSF25Q93038 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
TNFRSF25Q93038 AC073130.3-201ENST00000624389 2278 ntBASIC23.19■■□□□ 1.3
TNFRSF25Q93038 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC23.18■■□□□ 1.3
TNFRSF25Q93038 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC23.18■■□□□ 1.3
TNFRSF25Q93038 MKRN4P-201ENST00000444706 1521 ntBASIC23.18■■□□□ 1.3
TNFRSF25Q93038 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
TNFRSF25Q93038 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
TNFRSF25Q93038 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
TNFRSF25Q93038 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC23.18■■□□□ 1.3
TNFRSF25Q93038 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
TNFRSF25Q93038 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC23.18■■□□□ 1.3
TNFRSF25Q93038 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC23.18■■□□□ 1.3
TNFRSF25Q93038 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
TNFRSF25Q93038 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
TNFRSF25Q93038 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC23.18■■□□□ 1.3
TNFRSF25Q93038 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC23.18■■□□□ 1.3
TNFRSF25Q93038 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC23.18■■□□□ 1.3
TNFRSF25Q93038 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC23.18■■□□□ 1.3
TNFRSF25Q93038 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC23.18■■□□□ 1.3
TNFRSF25Q93038 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
TNFRSF25Q93038 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC23.18■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms