Protein–RNA interactions for Protein: Q8WWK9

CKAP2, Cytoskeleton-associated protein 2, humanhuman

Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2Q8WWK9 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CKAP2Q8WWK9 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
CKAP2Q8WWK9 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC20.21■□□□□ 0.83
CKAP2Q8WWK9 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
CKAP2Q8WWK9 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC20.21■□□□□ 0.83
CKAP2Q8WWK9 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CKAP2Q8WWK9 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CKAP2Q8WWK9 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CKAP2Q8WWK9 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC20.21■□□□□ 0.83
CKAP2Q8WWK9 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CKAP2Q8WWK9 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CKAP2Q8WWK9 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CKAP2Q8WWK9 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
CKAP2Q8WWK9 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CKAP2Q8WWK9 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CKAP2Q8WWK9 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CKAP2Q8WWK9 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CKAP2Q8WWK9 TREX1-205ENST00000625293 1783 ntBASIC20.21■□□□□ 0.83
CKAP2Q8WWK9 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
CKAP2Q8WWK9 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CKAP2Q8WWK9 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CKAP2Q8WWK9 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
CKAP2Q8WWK9 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC20.21■□□□□ 0.83
CKAP2Q8WWK9 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
CKAP2Q8WWK9 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC20.2■□□□□ 0.82
CKAP2Q8WWK9 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CKAP2Q8WWK9 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC20.2■□□□□ 0.82
CKAP2Q8WWK9 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC20.2■□□□□ 0.82
CKAP2Q8WWK9 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC20.2■□□□□ 0.82
CKAP2Q8WWK9 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CKAP2Q8WWK9 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CKAP2Q8WWK9 SNX3-202ENST00000349379 890 ntTSL 2 BASIC20.2■□□□□ 0.82
CKAP2Q8WWK9 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC20.2■□□□□ 0.82
CKAP2Q8WWK9 MIR3621-201ENST00000580529 85 ntBASIC20.2■□□□□ 0.82
CKAP2Q8WWK9 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CKAP2Q8WWK9 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CKAP2Q8WWK9 AL691432.2-201ENST00000607222 2038 ntBASIC20.2■□□□□ 0.82
CKAP2Q8WWK9 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
CKAP2Q8WWK9 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
CKAP2Q8WWK9 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
CKAP2Q8WWK9 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CKAP2Q8WWK9 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CKAP2Q8WWK9 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
CKAP2Q8WWK9 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CKAP2Q8WWK9 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
CKAP2Q8WWK9 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC20.19■□□□□ 0.82
CKAP2Q8WWK9 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
CKAP2Q8WWK9 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CKAP2Q8WWK9 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CKAP2Q8WWK9 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CKAP2Q8WWK9 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC20.19■□□□□ 0.82
CKAP2Q8WWK9 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CKAP2Q8WWK9 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CKAP2Q8WWK9 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CKAP2Q8WWK9 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CKAP2Q8WWK9 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC20.19■□□□□ 0.82
CKAP2Q8WWK9 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CKAP2Q8WWK9 AC133561.4-201ENST00000566112 224 ntBASIC20.19■□□□□ 0.82
CKAP2Q8WWK9 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC20.19■□□□□ 0.82
CKAP2Q8WWK9 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC20.19■□□□□ 0.82
CKAP2Q8WWK9 MIR2861-201ENST00000636310 90 ntBASIC20.19■□□□□ 0.82
CKAP2Q8WWK9 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
CKAP2Q8WWK9 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
CKAP2Q8WWK9 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CKAP2Q8WWK9 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
CKAP2Q8WWK9 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC20.19■□□□□ 0.82
CKAP2Q8WWK9 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CKAP2Q8WWK9 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CKAP2Q8WWK9 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
CKAP2Q8WWK9 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CKAP2Q8WWK9 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC20.19■□□□□ 0.82
CKAP2Q8WWK9 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CKAP2Q8WWK9 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CKAP2Q8WWK9 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CKAP2Q8WWK9 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CKAP2Q8WWK9 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
CKAP2Q8WWK9 AC093503.3-201ENST00000624917 2352 ntBASIC20.19■□□□□ 0.82
CKAP2Q8WWK9 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
CKAP2Q8WWK9 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CKAP2Q8WWK9 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CKAP2Q8WWK9 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC20.18■□□□□ 0.82
CKAP2Q8WWK9 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC20.18■□□□□ 0.82
CKAP2Q8WWK9 AC061975.6-201ENST00000579045 1553 ntBASIC20.18■□□□□ 0.82
CKAP2Q8WWK9 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CKAP2Q8WWK9 KRT16P3-201ENST00000439127 1283 ntBASIC20.18■□□□□ 0.82
CKAP2Q8WWK9 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC20.18■□□□□ 0.82
CKAP2Q8WWK9 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
CKAP2Q8WWK9 AC011298.3-201ENST00000615796 283 ntBASIC20.18■□□□□ 0.82
CKAP2Q8WWK9 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC20.18■□□□□ 0.82
CKAP2Q8WWK9 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CKAP2Q8WWK9 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CKAP2Q8WWK9 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CKAP2Q8WWK9 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC20.18■□□□□ 0.82
CKAP2Q8WWK9 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC20.18■□□□□ 0.82
CKAP2Q8WWK9 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CKAP2Q8WWK9 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CKAP2Q8WWK9 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CKAP2Q8WWK9 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CKAP2Q8WWK9 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
CKAP2Q8WWK9 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 17.8 ms