Protein–RNA interactions for Protein: Q8WV41

SNX33, Sorting nexin-33, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX33Q8WV41 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SNX33Q8WV41 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SNX33Q8WV41 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SNX33Q8WV41 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SNX33Q8WV41 HACD1-201ENST00000326961 773 ntTSL 2 BASIC18.31■□□□□ 0.52
SNX33Q8WV41 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC18.31■□□□□ 0.52
SNX33Q8WV41 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC18.31■□□□□ 0.52
SNX33Q8WV41 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC18.31■□□□□ 0.52
SNX33Q8WV41 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC18.31■□□□□ 0.52
SNX33Q8WV41 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC18.31■□□□□ 0.52
SNX33Q8WV41 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SNX33Q8WV41 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC18.31■□□□□ 0.52
SNX33Q8WV41 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SNX33Q8WV41 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC18.31■□□□□ 0.52
SNX33Q8WV41 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SNX33Q8WV41 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC18.31■□□□□ 0.52
SNX33Q8WV41 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
SNX33Q8WV41 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
SNX33Q8WV41 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SNX33Q8WV41 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SNX33Q8WV41 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC18.3■□□□□ 0.52
SNX33Q8WV41 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SNX33Q8WV41 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC18.3■□□□□ 0.52
SNX33Q8WV41 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC18.3■□□□□ 0.52
SNX33Q8WV41 AC011484.1-201ENST00000377652 1995 ntBASIC18.3■□□□□ 0.52
SNX33Q8WV41 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SNX33Q8WV41 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
SNX33Q8WV41 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SNX33Q8WV41 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
SNX33Q8WV41 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
SNX33Q8WV41 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SNX33Q8WV41 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
SNX33Q8WV41 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC18.3■□□□□ 0.52
SNX33Q8WV41 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC18.3■□□□□ 0.52
SNX33Q8WV41 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC18.3■□□□□ 0.52
SNX33Q8WV41 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SNX33Q8WV41 CPT2-209ENST00000636935 803 ntTSL 5 BASIC18.3■□□□□ 0.52
SNX33Q8WV41 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SNX33Q8WV41 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SNX33Q8WV41 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
SNX33Q8WV41 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
SNX33Q8WV41 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SNX33Q8WV41 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC18.3■□□□□ 0.52
SNX33Q8WV41 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SNX33Q8WV41 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC18.3■□□□□ 0.52
SNX33Q8WV41 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SNX33Q8WV41 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SNX33Q8WV41 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SNX33Q8WV41 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC18.29■□□□□ 0.52
SNX33Q8WV41 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SNX33Q8WV41 COX20-201ENST00000366528 568 ntTSL 2 BASIC18.29■□□□□ 0.52
SNX33Q8WV41 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SNX33Q8WV41 GXYLT1P2-201ENST00000433312 1230 ntBASIC18.29■□□□□ 0.52
SNX33Q8WV41 GLI3-203ENST00000437480 451 ntTSL 2 BASIC18.29■□□□□ 0.52
SNX33Q8WV41 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC18.29■□□□□ 0.52
SNX33Q8WV41 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC18.29■□□□□ 0.52
SNX33Q8WV41 NTF6G-201ENST00000591094 616 ntBASIC18.29■□□□□ 0.52
SNX33Q8WV41 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
SNX33Q8WV41 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC18.29■□□□□ 0.52
SNX33Q8WV41 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
SNX33Q8WV41 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC18.29■□□□□ 0.52
SNX33Q8WV41 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SNX33Q8WV41 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SNX33Q8WV41 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SNX33Q8WV41 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC18.29■□□□□ 0.52
SNX33Q8WV41 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
SNX33Q8WV41 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SNX33Q8WV41 AL512408.1-201ENST00000569378 2000 ntBASIC18.28■□□□□ 0.52
SNX33Q8WV41 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC18.28■□□□□ 0.52
SNX33Q8WV41 EXOC3-AS1-202ENST00000623673 1663 ntBASIC18.28■□□□□ 0.52
SNX33Q8WV41 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC18.28■□□□□ 0.52
SNX33Q8WV41 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC18.28■□□□□ 0.52
SNX33Q8WV41 AP004607.4-201ENST00000530158 1459 ntBASIC18.28■□□□□ 0.52
SNX33Q8WV41 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SNX33Q8WV41 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
SNX33Q8WV41 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
SNX33Q8WV41 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SNX33Q8WV41 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC18.28■□□□□ 0.52
SNX33Q8WV41 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC18.28■□□□□ 0.52
SNX33Q8WV41 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC18.28■□□□□ 0.52
SNX33Q8WV41 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SNX33Q8WV41 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SNX33Q8WV41 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
SNX33Q8WV41 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SNX33Q8WV41 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SNX33Q8WV41 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC18.28■□□□□ 0.52
SNX33Q8WV41 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SNX33Q8WV41 AC112907.3-201ENST00000577781 2400 ntBASIC18.28■□□□□ 0.52
SNX33Q8WV41 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
SNX33Q8WV41 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
SNX33Q8WV41 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
SNX33Q8WV41 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
SNX33Q8WV41 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SNX33Q8WV41 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SNX33Q8WV41 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SNX33Q8WV41 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC18.27■□□□□ 0.52
SNX33Q8WV41 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC18.27■□□□□ 0.52
SNX33Q8WV41 KRT18P5-201ENST00000436075 1291 ntBASIC18.27■□□□□ 0.52
SNX33Q8WV41 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC18.27■□□□□ 0.52
SNX33Q8WV41 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms