Protein–RNA interactions for Protein: Q8TDI8

TMC1, Transmembrane channel-like protein 1, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMC1Q8TDI8 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC28.35■■■□□ 2.13
TMC1Q8TDI8 AC128676.1-201ENST00000454392 318 ntBASIC28.35■■■□□ 2.13
TMC1Q8TDI8 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC28.35■■■□□ 2.13
TMC1Q8TDI8 AP003097.1-201ENST00000530657 1135 ntBASIC28.35■■■□□ 2.13
TMC1Q8TDI8 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC28.35■■■□□ 2.13
TMC1Q8TDI8 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC28.35■■■□□ 2.13
TMC1Q8TDI8 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC28.35■■■□□ 2.13
TMC1Q8TDI8 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC28.35■■■□□ 2.13
TMC1Q8TDI8 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC28.35■■■□□ 2.13
TMC1Q8TDI8 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC28.35■■■□□ 2.13
TMC1Q8TDI8 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
TMC1Q8TDI8 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC28.35■■■□□ 2.13
TMC1Q8TDI8 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC28.34■■■□□ 2.13
TMC1Q8TDI8 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC28.34■■■□□ 2.13
TMC1Q8TDI8 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC28.34■■■□□ 2.13
TMC1Q8TDI8 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC28.34■■■□□ 2.13
TMC1Q8TDI8 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC28.34■■■□□ 2.13
TMC1Q8TDI8 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC28.34■■■□□ 2.13
TMC1Q8TDI8 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC28.34■■■□□ 2.13
TMC1Q8TDI8 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
TMC1Q8TDI8 AC098590.1-201ENST00000468126 897 ntBASIC28.33■■■□□ 2.13
TMC1Q8TDI8 HES2-205ENST00000487437 968 ntTSL 3 BASIC28.33■■■□□ 2.13
TMC1Q8TDI8 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC28.33■■■□□ 2.13
TMC1Q8TDI8 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC28.33■■■□□ 2.13
TMC1Q8TDI8 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC28.33■■■□□ 2.13
TMC1Q8TDI8 AC087633.2-202ENST00000565166 1439 ntBASIC28.33■■■□□ 2.13
TMC1Q8TDI8 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC28.33■■■□□ 2.13
TMC1Q8TDI8 AC092368.3-202ENST00000574180 1591 ntBASIC28.33■■■□□ 2.12
TMC1Q8TDI8 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
TMC1Q8TDI8 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
TMC1Q8TDI8 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC28.32■■■□□ 2.12
TMC1Q8TDI8 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC28.32■■■□□ 2.12
TMC1Q8TDI8 PNMA6B-201ENST00000538162 1200 ntBASIC28.32■■■□□ 2.12
TMC1Q8TDI8 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC28.32■■■□□ 2.12
TMC1Q8TDI8 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC28.32■■■□□ 2.12
TMC1Q8TDI8 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
TMC1Q8TDI8 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
TMC1Q8TDI8 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
TMC1Q8TDI8 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
TMC1Q8TDI8 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC28.32■■■□□ 2.12
TMC1Q8TDI8 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
TMC1Q8TDI8 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
TMC1Q8TDI8 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC28.31■■■□□ 2.12
TMC1Q8TDI8 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
TMC1Q8TDI8 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC28.31■■■□□ 2.12
TMC1Q8TDI8 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC28.31■■■□□ 2.12
TMC1Q8TDI8 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC28.31■■■□□ 2.12
TMC1Q8TDI8 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
TMC1Q8TDI8 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC28.31■■■□□ 2.12
TMC1Q8TDI8 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC28.31■■■□□ 2.12
TMC1Q8TDI8 RPS2P52-201ENST00000469610 820 ntBASIC28.31■■■□□ 2.12
TMC1Q8TDI8 DET1-205ENST00000558413 583 ntTSL 4 BASIC28.31■■■□□ 2.12
TMC1Q8TDI8 IRX5-204ENST00000560154 879 ntTSL 5 BASIC28.31■■■□□ 2.12
TMC1Q8TDI8 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC28.31■■■□□ 2.12
TMC1Q8TDI8 AC008403.3-201ENST00000598924 454 ntBASIC28.31■■■□□ 2.12
TMC1Q8TDI8 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC28.31■■■□□ 2.12
TMC1Q8TDI8 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC28.31■■■□□ 2.12
TMC1Q8TDI8 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC28.31■■■□□ 2.12
TMC1Q8TDI8 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC28.31■■■□□ 2.12
TMC1Q8TDI8 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
TMC1Q8TDI8 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
TMC1Q8TDI8 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
TMC1Q8TDI8 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC28.31■■■□□ 2.12
TMC1Q8TDI8 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC28.31■■■□□ 2.12
TMC1Q8TDI8 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
TMC1Q8TDI8 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC28.3■■■□□ 2.12
TMC1Q8TDI8 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC28.3■■■□□ 2.12
TMC1Q8TDI8 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
TMC1Q8TDI8 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC28.3■■■□□ 2.12
TMC1Q8TDI8 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC28.3■■■□□ 2.12
TMC1Q8TDI8 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC28.3■■■□□ 2.12
TMC1Q8TDI8 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC28.3■■■□□ 2.12
TMC1Q8TDI8 AC073648.6-201ENST00000641589 218 ntBASIC28.3■■■□□ 2.12
TMC1Q8TDI8 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
TMC1Q8TDI8 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
TMC1Q8TDI8 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC28.29■■■□□ 2.12
TMC1Q8TDI8 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC28.29■■■□□ 2.12
TMC1Q8TDI8 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC28.29■■■□□ 2.12
TMC1Q8TDI8 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC28.29■■■□□ 2.12
TMC1Q8TDI8 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC28.29■■■□□ 2.12
TMC1Q8TDI8 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC28.29■■■□□ 2.12
TMC1Q8TDI8 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC28.29■■■□□ 2.12
TMC1Q8TDI8 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC28.29■■■□□ 2.12
TMC1Q8TDI8 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC28.29■■■□□ 2.12
TMC1Q8TDI8 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC28.29■■■□□ 2.12
TMC1Q8TDI8 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC28.28■■■□□ 2.12
TMC1Q8TDI8 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
TMC1Q8TDI8 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC28.28■■■□□ 2.12
TMC1Q8TDI8 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
TMC1Q8TDI8 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
TMC1Q8TDI8 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC28.28■■■□□ 2.12
TMC1Q8TDI8 C2orf69P4-201ENST00000565394 541 ntBASIC28.28■■■□□ 2.12
TMC1Q8TDI8 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC28.28■■■□□ 2.12
TMC1Q8TDI8 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC28.28■■■□□ 2.12
TMC1Q8TDI8 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC28.27■■■□□ 2.12
TMC1Q8TDI8 CRK-204ENST00000574295 1391 ntTSL 5 BASIC28.27■■■□□ 2.12
TMC1Q8TDI8 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC28.27■■■□□ 2.12
TMC1Q8TDI8 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC28.27■■■□□ 2.12
TMC1Q8TDI8 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC28.27■■■□□ 2.12
TMC1Q8TDI8 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
Retrieved 100 of 98,524 protein–RNA pairs in 15.8 ms