Protein–RNA interactions for Protein: Q8TBN0

RAB3IL1, Guanine nucleotide exchange factor for Rab-3A, humanhuman

Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IL1Q8TBN0 AP004607.4-201ENST00000530158 1459 ntBASIC20.24■□□□□ 0.83
RAB3IL1Q8TBN0 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
RAB3IL1Q8TBN0 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC20.24■□□□□ 0.83
RAB3IL1Q8TBN0 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
RAB3IL1Q8TBN0 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
RAB3IL1Q8TBN0 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RAB3IL1Q8TBN0 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
RAB3IL1Q8TBN0 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RAB3IL1Q8TBN0 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
RAB3IL1Q8TBN0 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC20.24■□□□□ 0.83
RAB3IL1Q8TBN0 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RAB3IL1Q8TBN0 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
RAB3IL1Q8TBN0 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RAB3IL1Q8TBN0 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
RAB3IL1Q8TBN0 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
RAB3IL1Q8TBN0 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
RAB3IL1Q8TBN0 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
RAB3IL1Q8TBN0 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC20.23■□□□□ 0.83
RAB3IL1Q8TBN0 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RAB3IL1Q8TBN0 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RAB3IL1Q8TBN0 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
RAB3IL1Q8TBN0 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC20.23■□□□□ 0.83
RAB3IL1Q8TBN0 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RAB3IL1Q8TBN0 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
RAB3IL1Q8TBN0 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
RAB3IL1Q8TBN0 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RAB3IL1Q8TBN0 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RAB3IL1Q8TBN0 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC20.23■□□□□ 0.83
RAB3IL1Q8TBN0 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC20.23■□□□□ 0.83
RAB3IL1Q8TBN0 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
RAB3IL1Q8TBN0 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
RAB3IL1Q8TBN0 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
RAB3IL1Q8TBN0 AC019069.1-201ENST00000610008 1333 ntBASIC20.23■□□□□ 0.83
RAB3IL1Q8TBN0 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
RAB3IL1Q8TBN0 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
RAB3IL1Q8TBN0 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
RAB3IL1Q8TBN0 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
RAB3IL1Q8TBN0 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
RAB3IL1Q8TBN0 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RAB3IL1Q8TBN0 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC20.22■□□□□ 0.83
RAB3IL1Q8TBN0 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC20.22■□□□□ 0.83
RAB3IL1Q8TBN0 SRR-208ENST00000576848 588 ntTSL 4 BASIC20.22■□□□□ 0.83
RAB3IL1Q8TBN0 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC20.22■□□□□ 0.83
RAB3IL1Q8TBN0 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC20.22■□□□□ 0.83
RAB3IL1Q8TBN0 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RAB3IL1Q8TBN0 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC20.22■□□□□ 0.83
RAB3IL1Q8TBN0 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC20.22■□□□□ 0.83
RAB3IL1Q8TBN0 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC20.22■□□□□ 0.83
RAB3IL1Q8TBN0 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
RAB3IL1Q8TBN0 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC20.21■□□□□ 0.83
RAB3IL1Q8TBN0 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RAB3IL1Q8TBN0 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RAB3IL1Q8TBN0 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
RAB3IL1Q8TBN0 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC20.21■□□□□ 0.83
RAB3IL1Q8TBN0 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
RAB3IL1Q8TBN0 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC20.21■□□□□ 0.83
RAB3IL1Q8TBN0 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC20.21■□□□□ 0.83
RAB3IL1Q8TBN0 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RAB3IL1Q8TBN0 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
RAB3IL1Q8TBN0 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
RAB3IL1Q8TBN0 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC20.21■□□□□ 0.83
RAB3IL1Q8TBN0 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC20.21■□□□□ 0.83
RAB3IL1Q8TBN0 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC20.21■□□□□ 0.83
RAB3IL1Q8TBN0 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RAB3IL1Q8TBN0 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RAB3IL1Q8TBN0 AC018445.3-201ENST00000624177 1945 ntBASIC20.21■□□□□ 0.83
RAB3IL1Q8TBN0 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
RAB3IL1Q8TBN0 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RAB3IL1Q8TBN0 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC20.21■□□□□ 0.83
RAB3IL1Q8TBN0 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC20.2■□□□□ 0.83
RAB3IL1Q8TBN0 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RAB3IL1Q8TBN0 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RAB3IL1Q8TBN0 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RAB3IL1Q8TBN0 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RAB3IL1Q8TBN0 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RAB3IL1Q8TBN0 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
RAB3IL1Q8TBN0 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RAB3IL1Q8TBN0 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC20.2■□□□□ 0.82
RAB3IL1Q8TBN0 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
RAB3IL1Q8TBN0 RPP21-222ENST00000433076 577 ntTSL 2 BASIC20.2■□□□□ 0.82
RAB3IL1Q8TBN0 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC20.2■□□□□ 0.82
RAB3IL1Q8TBN0 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC20.2■□□□□ 0.82
RAB3IL1Q8TBN0 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC20.2■□□□□ 0.82
RAB3IL1Q8TBN0 EEF1DP3-203ENST00000566025 782 ntBASIC20.2■□□□□ 0.82
RAB3IL1Q8TBN0 AC053503.5-201ENST00000601508 636 ntBASIC20.2■□□□□ 0.82
RAB3IL1Q8TBN0 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RAB3IL1Q8TBN0 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
RAB3IL1Q8TBN0 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RAB3IL1Q8TBN0 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RAB3IL1Q8TBN0 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
RAB3IL1Q8TBN0 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC20.19■□□□□ 0.82
RAB3IL1Q8TBN0 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC20.19■□□□□ 0.82
RAB3IL1Q8TBN0 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
RAB3IL1Q8TBN0 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC20.19■□□□□ 0.82
RAB3IL1Q8TBN0 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RAB3IL1Q8TBN0 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RAB3IL1Q8TBN0 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
RAB3IL1Q8TBN0 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RAB3IL1Q8TBN0 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RAB3IL1Q8TBN0 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC20.19■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms