Protein–RNA interactions for Protein: Q8TAD8

SNIP1, Smad nuclear-interacting protein 1, humanhuman

Known RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1Q8TAD8 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SNIP1Q8TAD8 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC19.26■□□□□ 0.67
SNIP1Q8TAD8 AL390719.1-204ENST00000412397 1219 ntBASIC19.26■□□□□ 0.67
SNIP1Q8TAD8 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC19.26■□□□□ 0.67
SNIP1Q8TAD8 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC19.26■□□□□ 0.67
SNIP1Q8TAD8 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC19.26■□□□□ 0.67
SNIP1Q8TAD8 NME3-204ENST00000563498 920 ntTSL 2 BASIC19.26■□□□□ 0.67
SNIP1Q8TAD8 MIR6786-201ENST00000616843 113 ntBASIC19.26■□□□□ 0.67
SNIP1Q8TAD8 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC19.26■□□□□ 0.67
SNIP1Q8TAD8 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SNIP1Q8TAD8 GCA-201ENST00000233612 1694 ntTSL 2 BASIC19.26■□□□□ 0.67
SNIP1Q8TAD8 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
SNIP1Q8TAD8 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
SNIP1Q8TAD8 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC19.25■□□□□ 0.67
SNIP1Q8TAD8 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC19.25■□□□□ 0.67
SNIP1Q8TAD8 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SNIP1Q8TAD8 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SNIP1Q8TAD8 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
SNIP1Q8TAD8 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SNIP1Q8TAD8 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SNIP1Q8TAD8 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC19.25■□□□□ 0.67
SNIP1Q8TAD8 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
SNIP1Q8TAD8 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SNIP1Q8TAD8 AL353807.1-201ENST00000427475 662 ntBASIC19.25■□□□□ 0.67
SNIP1Q8TAD8 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
SNIP1Q8TAD8 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SNIP1Q8TAD8 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC19.25■□□□□ 0.67
SNIP1Q8TAD8 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC19.25■□□□□ 0.67
SNIP1Q8TAD8 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC19.25■□□□□ 0.67
SNIP1Q8TAD8 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC19.25■□□□□ 0.67
SNIP1Q8TAD8 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC19.25■□□□□ 0.67
SNIP1Q8TAD8 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SNIP1Q8TAD8 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC19.25■□□□□ 0.67
SNIP1Q8TAD8 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
SNIP1Q8TAD8 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SNIP1Q8TAD8 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
SNIP1Q8TAD8 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
SNIP1Q8TAD8 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SNIP1Q8TAD8 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SNIP1Q8TAD8 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC19.24■□□□□ 0.67
SNIP1Q8TAD8 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SNIP1Q8TAD8 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
SNIP1Q8TAD8 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SNIP1Q8TAD8 CRAT-202ENST00000393384 973 ntTSL 2 BASIC19.24■□□□□ 0.67
SNIP1Q8TAD8 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC19.24■□□□□ 0.67
SNIP1Q8TAD8 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC19.24■□□□□ 0.67
SNIP1Q8TAD8 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
SNIP1Q8TAD8 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC19.24■□□□□ 0.67
SNIP1Q8TAD8 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC19.24■□□□□ 0.67
SNIP1Q8TAD8 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC19.24■□□□□ 0.67
SNIP1Q8TAD8 AF186192.3-201ENST00000583427 947 ntBASIC19.24■□□□□ 0.67
SNIP1Q8TAD8 RPS15-203ENST00000586096 570 ntTSL 2 BASIC19.24■□□□□ 0.67
SNIP1Q8TAD8 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC19.24■□□□□ 0.67
SNIP1Q8TAD8 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC19.24■□□□□ 0.67
SNIP1Q8TAD8 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SNIP1Q8TAD8 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
SNIP1Q8TAD8 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
SNIP1Q8TAD8 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SNIP1Q8TAD8 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC19.24■□□□□ 0.67
SNIP1Q8TAD8 AC116050.2-201ENST00000612102 1779 ntBASIC19.24■□□□□ 0.67
SNIP1Q8TAD8 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SNIP1Q8TAD8 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SNIP1Q8TAD8 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SNIP1Q8TAD8 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
SNIP1Q8TAD8 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SNIP1Q8TAD8 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC19.23■□□□□ 0.67
SNIP1Q8TAD8 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SNIP1Q8TAD8 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SNIP1Q8TAD8 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
SNIP1Q8TAD8 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC19.22■□□□□ 0.67
SNIP1Q8TAD8 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC19.22■□□□□ 0.67
SNIP1Q8TAD8 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SNIP1Q8TAD8 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
SNIP1Q8TAD8 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC19.22■□□□□ 0.67
SNIP1Q8TAD8 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SNIP1Q8TAD8 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SNIP1Q8TAD8 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC19.22■□□□□ 0.67
SNIP1Q8TAD8 AC005521.1-201ENST00000393351 872 ntBASIC19.22■□□□□ 0.67
SNIP1Q8TAD8 PGM5P4-201ENST00000421970 445 ntBASIC19.22■□□□□ 0.67
SNIP1Q8TAD8 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SNIP1Q8TAD8 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC19.22■□□□□ 0.67
SNIP1Q8TAD8 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
SNIP1Q8TAD8 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SNIP1Q8TAD8 NFE2L3P1-201ENST00000588207 1959 ntBASIC19.22■□□□□ 0.67
SNIP1Q8TAD8 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SNIP1Q8TAD8 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC19.22■□□□□ 0.67
SNIP1Q8TAD8 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SNIP1Q8TAD8 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
SNIP1Q8TAD8 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SNIP1Q8TAD8 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SNIP1Q8TAD8 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SNIP1Q8TAD8 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SNIP1Q8TAD8 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
SNIP1Q8TAD8 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SNIP1Q8TAD8 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SNIP1Q8TAD8 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SNIP1Q8TAD8 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC19.21■□□□□ 0.67
SNIP1Q8TAD8 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
SNIP1Q8TAD8 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SNIP1Q8TAD8 AC113347.1-201ENST00000413321 391 ntBASIC19.21■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms