Protein–RNA interactions for Protein: Q7Z5J4

RAI1, Retinoic acid-induced protein 1, humanhuman

Predicted RBP Predictions only

Length 1,906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI1Q7Z5J4 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RAI1Q7Z5J4 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC17.48■□□□□ 0.39
RAI1Q7Z5J4 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
RAI1Q7Z5J4 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RAI1Q7Z5J4 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RAI1Q7Z5J4 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
RAI1Q7Z5J4 SERF2-207ENST00000409614 582 ntTSL 2 BASIC17.47■□□□□ 0.39
RAI1Q7Z5J4 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC17.47■□□□□ 0.39
RAI1Q7Z5J4 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
RAI1Q7Z5J4 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC17.47■□□□□ 0.39
RAI1Q7Z5J4 SNORA78-201ENST00000459373 127 ntBASIC17.47■□□□□ 0.39
RAI1Q7Z5J4 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
RAI1Q7Z5J4 RN7SL471P-201ENST00000580476 299 ntBASIC17.47■□□□□ 0.39
RAI1Q7Z5J4 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC17.47■□□□□ 0.39
RAI1Q7Z5J4 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
RAI1Q7Z5J4 FEM1AP4-201ENST00000443167 1987 ntBASIC17.47■□□□□ 0.39
RAI1Q7Z5J4 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
RAI1Q7Z5J4 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
RAI1Q7Z5J4 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RAI1Q7Z5J4 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC17.47■□□□□ 0.39
RAI1Q7Z5J4 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
RAI1Q7Z5J4 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC17.47■□□□□ 0.39
RAI1Q7Z5J4 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
RAI1Q7Z5J4 Z99916.2-201ENST00000604037 246 ntBASIC17.47■□□□□ 0.39
RAI1Q7Z5J4 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RAI1Q7Z5J4 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RAI1Q7Z5J4 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RAI1Q7Z5J4 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC17.46■□□□□ 0.39
RAI1Q7Z5J4 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC17.46■□□□□ 0.39
RAI1Q7Z5J4 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
RAI1Q7Z5J4 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC17.46■□□□□ 0.39
RAI1Q7Z5J4 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
RAI1Q7Z5J4 PGM5P4-201ENST00000421970 445 ntBASIC17.46■□□□□ 0.39
RAI1Q7Z5J4 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC17.46■□□□□ 0.39
RAI1Q7Z5J4 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC17.46■□□□□ 0.39
RAI1Q7Z5J4 AL355075.4-201ENST00000554988 638 ntBASIC17.46■□□□□ 0.39
RAI1Q7Z5J4 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
RAI1Q7Z5J4 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC17.46■□□□□ 0.39
RAI1Q7Z5J4 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC17.46■□□□□ 0.39
RAI1Q7Z5J4 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC17.46■□□□□ 0.39
RAI1Q7Z5J4 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
RAI1Q7Z5J4 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
RAI1Q7Z5J4 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC17.46■□□□□ 0.39
RAI1Q7Z5J4 AC007375.3-201ENST00000600936 2314 ntBASIC17.46■□□□□ 0.39
RAI1Q7Z5J4 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC17.46■□□□□ 0.38
RAI1Q7Z5J4 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
RAI1Q7Z5J4 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
RAI1Q7Z5J4 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RAI1Q7Z5J4 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
RAI1Q7Z5J4 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RAI1Q7Z5J4 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC17.45■□□□□ 0.38
RAI1Q7Z5J4 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
RAI1Q7Z5J4 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC17.45■□□□□ 0.38
RAI1Q7Z5J4 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RAI1Q7Z5J4 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
RAI1Q7Z5J4 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC17.45■□□□□ 0.38
RAI1Q7Z5J4 PARN-205ENST00000539279 1557 ntTSL 2 BASIC17.45■□□□□ 0.38
RAI1Q7Z5J4 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC17.45■□□□□ 0.38
RAI1Q7Z5J4 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RAI1Q7Z5J4 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC17.45■□□□□ 0.38
RAI1Q7Z5J4 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
RAI1Q7Z5J4 DHDH-203ENST00000522614 776 ntTSL 5 BASIC17.45■□□□□ 0.38
RAI1Q7Z5J4 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC17.45■□□□□ 0.38
RAI1Q7Z5J4 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
RAI1Q7Z5J4 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
RAI1Q7Z5J4 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC17.44■□□□□ 0.38
RAI1Q7Z5J4 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
RAI1Q7Z5J4 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC17.44■□□□□ 0.38
RAI1Q7Z5J4 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC17.44■□□□□ 0.38
RAI1Q7Z5J4 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC17.44■□□□□ 0.38
RAI1Q7Z5J4 SPIB-206ENST00000596074 847 ntTSL 2 BASIC17.44■□□□□ 0.38
RAI1Q7Z5J4 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
RAI1Q7Z5J4 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
RAI1Q7Z5J4 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RAI1Q7Z5J4 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RAI1Q7Z5J4 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
RAI1Q7Z5J4 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
RAI1Q7Z5J4 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RAI1Q7Z5J4 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RAI1Q7Z5J4 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RAI1Q7Z5J4 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
RAI1Q7Z5J4 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC17.43■□□□□ 0.38
RAI1Q7Z5J4 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RAI1Q7Z5J4 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
RAI1Q7Z5J4 RER1-204ENST00000378518 522 ntTSL 3 BASIC17.43■□□□□ 0.38
RAI1Q7Z5J4 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC17.43■□□□□ 0.38
RAI1Q7Z5J4 GGT1-206ENST00000404223 952 ntTSL 2 BASIC17.43■□□□□ 0.38
RAI1Q7Z5J4 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RAI1Q7Z5J4 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RAI1Q7Z5J4 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC17.43■□□□□ 0.38
RAI1Q7Z5J4 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
RAI1Q7Z5J4 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
RAI1Q7Z5J4 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
RAI1Q7Z5J4 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RAI1Q7Z5J4 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC17.43■□□□□ 0.38
RAI1Q7Z5J4 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC17.43■□□□□ 0.38
RAI1Q7Z5J4 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RAI1Q7Z5J4 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RAI1Q7Z5J4 RPS2P55-201ENST00000397318 883 ntBASIC17.43■□□□□ 0.38
RAI1Q7Z5J4 AC239809.2-201ENST00000415381 517 ntBASIC17.43■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms