Protein–RNA interactions for Protein: Q6ZNA4

RNF111, E3 ubiquitin-protein ligase Arkadia, humanhuman

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF111Q6ZNA4 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC19.76■□□□□ 0.75
RNF111Q6ZNA4 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC19.76■□□□□ 0.75
RNF111Q6ZNA4 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RNF111Q6ZNA4 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
RNF111Q6ZNA4 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RNF111Q6ZNA4 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
RNF111Q6ZNA4 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
RNF111Q6ZNA4 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC19.75■□□□□ 0.75
RNF111Q6ZNA4 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
RNF111Q6ZNA4 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC19.75■□□□□ 0.75
RNF111Q6ZNA4 NTF6G-201ENST00000591094 616 ntBASIC19.75■□□□□ 0.75
RNF111Q6ZNA4 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC19.75■□□□□ 0.75
RNF111Q6ZNA4 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
RNF111Q6ZNA4 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
RNF111Q6ZNA4 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
RNF111Q6ZNA4 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
RNF111Q6ZNA4 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
RNF111Q6ZNA4 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC19.74■□□□□ 0.75
RNF111Q6ZNA4 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RNF111Q6ZNA4 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RNF111Q6ZNA4 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC19.74■□□□□ 0.75
RNF111Q6ZNA4 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC19.74■□□□□ 0.75
RNF111Q6ZNA4 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RNF111Q6ZNA4 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RNF111Q6ZNA4 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC19.74■□□□□ 0.75
RNF111Q6ZNA4 AL162430.1-201ENST00000480705 870 ntBASIC19.74■□□□□ 0.75
RNF111Q6ZNA4 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RNF111Q6ZNA4 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC19.74■□□□□ 0.75
RNF111Q6ZNA4 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC19.74■□□□□ 0.75
RNF111Q6ZNA4 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
RNF111Q6ZNA4 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
RNF111Q6ZNA4 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
RNF111Q6ZNA4 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
RNF111Q6ZNA4 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
RNF111Q6ZNA4 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
RNF111Q6ZNA4 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
RNF111Q6ZNA4 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RNF111Q6ZNA4 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RNF111Q6ZNA4 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC19.73■□□□□ 0.75
RNF111Q6ZNA4 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
RNF111Q6ZNA4 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC19.73■□□□□ 0.75
RNF111Q6ZNA4 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC19.73■□□□□ 0.75
RNF111Q6ZNA4 TESC-206ENST00000541210 936 ntTSL 3 BASIC19.73■□□□□ 0.75
RNF111Q6ZNA4 GALNS-213ENST00000569433 723 ntTSL 3 BASIC19.73■□□□□ 0.75
RNF111Q6ZNA4 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
RNF111Q6ZNA4 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC19.73■□□□□ 0.75
RNF111Q6ZNA4 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
RNF111Q6ZNA4 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RNF111Q6ZNA4 AC004854.2-201ENST00000608450 1441 ntBASIC19.73■□□□□ 0.75
RNF111Q6ZNA4 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC19.73■□□□□ 0.75
RNF111Q6ZNA4 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC19.73■□□□□ 0.75
RNF111Q6ZNA4 BID-203ENST00000399765 1879 ntTSL 2 BASIC19.73■□□□□ 0.75
RNF111Q6ZNA4 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC19.73■□□□□ 0.75
RNF111Q6ZNA4 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC19.72■□□□□ 0.75
RNF111Q6ZNA4 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RNF111Q6ZNA4 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
RNF111Q6ZNA4 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
RNF111Q6ZNA4 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RNF111Q6ZNA4 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC19.72■□□□□ 0.75
RNF111Q6ZNA4 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RNF111Q6ZNA4 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
RNF111Q6ZNA4 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RNF111Q6ZNA4 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC19.72■□□□□ 0.75
RNF111Q6ZNA4 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RNF111Q6ZNA4 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC19.72■□□□□ 0.75
RNF111Q6ZNA4 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC19.72■□□□□ 0.75
RNF111Q6ZNA4 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
RNF111Q6ZNA4 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC19.72■□□□□ 0.75
RNF111Q6ZNA4 KRT18P5-201ENST00000436075 1291 ntBASIC19.72■□□□□ 0.75
RNF111Q6ZNA4 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC19.72■□□□□ 0.75
RNF111Q6ZNA4 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC19.72■□□□□ 0.75
RNF111Q6ZNA4 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC19.72■□□□□ 0.75
RNF111Q6ZNA4 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RNF111Q6ZNA4 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RNF111Q6ZNA4 AP004607.4-201ENST00000530158 1459 ntBASIC19.72■□□□□ 0.75
RNF111Q6ZNA4 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RNF111Q6ZNA4 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC19.72■□□□□ 0.75
RNF111Q6ZNA4 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC19.72■□□□□ 0.75
RNF111Q6ZNA4 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RNF111Q6ZNA4 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RNF111Q6ZNA4 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RNF111Q6ZNA4 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RNF111Q6ZNA4 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RNF111Q6ZNA4 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RNF111Q6ZNA4 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RNF111Q6ZNA4 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC19.71■□□□□ 0.75
RNF111Q6ZNA4 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC19.71■□□□□ 0.75
RNF111Q6ZNA4 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
RNF111Q6ZNA4 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RNF111Q6ZNA4 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
RNF111Q6ZNA4 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
RNF111Q6ZNA4 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RNF111Q6ZNA4 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
RNF111Q6ZNA4 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC19.71■□□□□ 0.75
RNF111Q6ZNA4 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC19.71■□□□□ 0.75
RNF111Q6ZNA4 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC19.71■□□□□ 0.75
RNF111Q6ZNA4 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC19.71■□□□□ 0.75
RNF111Q6ZNA4 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
RNF111Q6ZNA4 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RNF111Q6ZNA4 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms