Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC18.27■□□□□ 0.52
NHLRC1Q6VVB1 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
NHLRC1Q6VVB1 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
NHLRC1Q6VVB1 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
NHLRC1Q6VVB1 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
NHLRC1Q6VVB1 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
NHLRC1Q6VVB1 AC016405.3-201ENST00000607710 860 ntBASIC18.27■□□□□ 0.52
NHLRC1Q6VVB1 FAM21FP-204ENST00000608637 956 ntBASIC18.27■□□□□ 0.52
NHLRC1Q6VVB1 IKBKGP1-201ENST00000612193 1073 ntBASIC18.27■□□□□ 0.52
NHLRC1Q6VVB1 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC18.27■□□□□ 0.52
NHLRC1Q6VVB1 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC18.27■□□□□ 0.52
NHLRC1Q6VVB1 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC18.27■□□□□ 0.52
NHLRC1Q6VVB1 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
NHLRC1Q6VVB1 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC18.27■□□□□ 0.51
NHLRC1Q6VVB1 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
NHLRC1Q6VVB1 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
NHLRC1Q6VVB1 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
NHLRC1Q6VVB1 FP700111.2-201ENST00000619190 1892 ntBASIC18.26■□□□□ 0.51
NHLRC1Q6VVB1 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
NHLRC1Q6VVB1 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
NHLRC1Q6VVB1 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
NHLRC1Q6VVB1 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC18.26■□□□□ 0.51
NHLRC1Q6VVB1 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
NHLRC1Q6VVB1 PARP1-210ENST00000629232 477 ntTSL 5 BASIC18.26■□□□□ 0.51
NHLRC1Q6VVB1 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
NHLRC1Q6VVB1 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
NHLRC1Q6VVB1 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
NHLRC1Q6VVB1 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC18.26■□□□□ 0.51
NHLRC1Q6VVB1 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
NHLRC1Q6VVB1 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
NHLRC1Q6VVB1 GABARAPL3-202ENST00000624044 1851 ntBASIC18.26■□□□□ 0.51
NHLRC1Q6VVB1 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC18.26■□□□□ 0.51
NHLRC1Q6VVB1 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
NHLRC1Q6VVB1 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC18.26■□□□□ 0.51
NHLRC1Q6VVB1 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
NHLRC1Q6VVB1 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
NHLRC1Q6VVB1 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC18.25■□□□□ 0.51
NHLRC1Q6VVB1 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
NHLRC1Q6VVB1 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
NHLRC1Q6VVB1 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
NHLRC1Q6VVB1 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC18.25■□□□□ 0.51
NHLRC1Q6VVB1 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
NHLRC1Q6VVB1 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
NHLRC1Q6VVB1 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
NHLRC1Q6VVB1 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
NHLRC1Q6VVB1 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
NHLRC1Q6VVB1 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
NHLRC1Q6VVB1 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC18.25■□□□□ 0.51
NHLRC1Q6VVB1 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
NHLRC1Q6VVB1 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC18.25■□□□□ 0.51
NHLRC1Q6VVB1 BID-214ENST00000617586 542 ntTSL 5 BASIC18.25■□□□□ 0.51
NHLRC1Q6VVB1 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC18.25■□□□□ 0.51
NHLRC1Q6VVB1 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC18.25■□□□□ 0.51
NHLRC1Q6VVB1 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
NHLRC1Q6VVB1 LINC01006-201ENST00000333319 2292 ntBASIC18.25■□□□□ 0.51
NHLRC1Q6VVB1 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
NHLRC1Q6VVB1 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
NHLRC1Q6VVB1 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
NHLRC1Q6VVB1 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
NHLRC1Q6VVB1 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
NHLRC1Q6VVB1 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
NHLRC1Q6VVB1 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
NHLRC1Q6VVB1 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
NHLRC1Q6VVB1 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
NHLRC1Q6VVB1 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
NHLRC1Q6VVB1 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC18.24■□□□□ 0.51
NHLRC1Q6VVB1 CDV3P1-201ENST00000471403 739 ntBASIC18.24■□□□□ 0.51
NHLRC1Q6VVB1 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC18.24■□□□□ 0.51
NHLRC1Q6VVB1 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC18.24■□□□□ 0.51
NHLRC1Q6VVB1 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC18.24■□□□□ 0.51
NHLRC1Q6VVB1 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
NHLRC1Q6VVB1 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
NHLRC1Q6VVB1 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC18.24■□□□□ 0.51
NHLRC1Q6VVB1 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
NHLRC1Q6VVB1 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
NHLRC1Q6VVB1 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
NHLRC1Q6VVB1 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC18.23■□□□□ 0.51
NHLRC1Q6VVB1 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
NHLRC1Q6VVB1 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
NHLRC1Q6VVB1 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
NHLRC1Q6VVB1 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
NHLRC1Q6VVB1 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
NHLRC1Q6VVB1 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
NHLRC1Q6VVB1 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
NHLRC1Q6VVB1 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
NHLRC1Q6VVB1 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
NHLRC1Q6VVB1 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
NHLRC1Q6VVB1 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
NHLRC1Q6VVB1 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
NHLRC1Q6VVB1 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
NHLRC1Q6VVB1 AC004911.1-201ENST00000416316 871 ntBASIC18.23■□□□□ 0.51
NHLRC1Q6VVB1 CASP6-205ENST00000505486 538 ntTSL 4 BASIC18.23■□□□□ 0.51
NHLRC1Q6VVB1 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC18.23■□□□□ 0.51
NHLRC1Q6VVB1 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
NHLRC1Q6VVB1 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC18.23■□□□□ 0.51
NHLRC1Q6VVB1 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
NHLRC1Q6VVB1 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
NHLRC1Q6VVB1 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
NHLRC1Q6VVB1 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
NHLRC1Q6VVB1 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms