Protein–RNA interactions for Protein: Q3KNV8

PCGF3, Polycomb group RING finger protein 3, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF3Q3KNV8 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
PCGF3Q3KNV8 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
PCGF3Q3KNV8 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
PCGF3Q3KNV8 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
PCGF3Q3KNV8 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
PCGF3Q3KNV8 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
PCGF3Q3KNV8 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC17.98■□□□□ 0.47
PCGF3Q3KNV8 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
PCGF3Q3KNV8 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC17.97■□□□□ 0.47
PCGF3Q3KNV8 ME2-218ENST00000640965 2476 ntTSL 5 BASIC17.97■□□□□ 0.47
PCGF3Q3KNV8 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
PCGF3Q3KNV8 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
PCGF3Q3KNV8 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC17.97■□□□□ 0.47
PCGF3Q3KNV8 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
PCGF3Q3KNV8 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC17.97■□□□□ 0.47
PCGF3Q3KNV8 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PCGF3Q3KNV8 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC17.97■□□□□ 0.47
PCGF3Q3KNV8 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
PCGF3Q3KNV8 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
PCGF3Q3KNV8 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PCGF3Q3KNV8 RNF146-206ENST00000480444 843 ntTSL 2 BASIC17.97■□□□□ 0.47
PCGF3Q3KNV8 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PCGF3Q3KNV8 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PCGF3Q3KNV8 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC17.97■□□□□ 0.47
PCGF3Q3KNV8 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC17.97■□□□□ 0.47
PCGF3Q3KNV8 MDK-213ENST00000617138 635 ntTSL 2 BASIC17.97■□□□□ 0.47
PCGF3Q3KNV8 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC17.97■□□□□ 0.47
PCGF3Q3KNV8 RARRES2P11-201ENST00000635158 484 ntBASIC17.97■□□□□ 0.47
PCGF3Q3KNV8 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
PCGF3Q3KNV8 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
PCGF3Q3KNV8 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PCGF3Q3KNV8 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
PCGF3Q3KNV8 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PCGF3Q3KNV8 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
PCGF3Q3KNV8 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
PCGF3Q3KNV8 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC17.97■□□□□ 0.47
PCGF3Q3KNV8 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PCGF3Q3KNV8 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PCGF3Q3KNV8 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
PCGF3Q3KNV8 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PCGF3Q3KNV8 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC17.96■□□□□ 0.47
PCGF3Q3KNV8 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PCGF3Q3KNV8 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC17.96■□□□□ 0.47
PCGF3Q3KNV8 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC17.96■□□□□ 0.47
PCGF3Q3KNV8 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
PCGF3Q3KNV8 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
PCGF3Q3KNV8 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC17.96■□□□□ 0.47
PCGF3Q3KNV8 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
PCGF3Q3KNV8 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PCGF3Q3KNV8 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC17.96■□□□□ 0.47
PCGF3Q3KNV8 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PCGF3Q3KNV8 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
PCGF3Q3KNV8 PARP1-202ENST00000366792 553 ntTSL 3 BASIC17.96■□□□□ 0.47
PCGF3Q3KNV8 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC17.96■□□□□ 0.47
PCGF3Q3KNV8 POU5F1P4-201ENST00000413175 1085 ntBASIC17.96■□□□□ 0.47
PCGF3Q3KNV8 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC17.96■□□□□ 0.47
PCGF3Q3KNV8 AC080038.1-201ENST00000611274 1154 ntBASIC17.96■□□□□ 0.47
PCGF3Q3KNV8 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC17.96■□□□□ 0.47
PCGF3Q3KNV8 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC17.96■□□□□ 0.47
PCGF3Q3KNV8 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC17.96■□□□□ 0.47
PCGF3Q3KNV8 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PCGF3Q3KNV8 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.46
PCGF3Q3KNV8 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC17.96■□□□□ 0.46
PCGF3Q3KNV8 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC17.96■□□□□ 0.46
PCGF3Q3KNV8 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC17.96■□□□□ 0.46
PCGF3Q3KNV8 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PCGF3Q3KNV8 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PCGF3Q3KNV8 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC17.95■□□□□ 0.46
PCGF3Q3KNV8 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
PCGF3Q3KNV8 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PCGF3Q3KNV8 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PCGF3Q3KNV8 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
PCGF3Q3KNV8 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC17.95■□□□□ 0.46
PCGF3Q3KNV8 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
PCGF3Q3KNV8 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC17.95■□□□□ 0.46
PCGF3Q3KNV8 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC17.95■□□□□ 0.46
PCGF3Q3KNV8 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC17.95■□□□□ 0.46
PCGF3Q3KNV8 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
PCGF3Q3KNV8 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
PCGF3Q3KNV8 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
PCGF3Q3KNV8 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
PCGF3Q3KNV8 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PCGF3Q3KNV8 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
PCGF3Q3KNV8 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PCGF3Q3KNV8 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC17.95■□□□□ 0.46
PCGF3Q3KNV8 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC17.95■□□□□ 0.46
PCGF3Q3KNV8 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
PCGF3Q3KNV8 SLC7A5P1-201ENST00000568957 537 ntBASIC17.95■□□□□ 0.46
PCGF3Q3KNV8 TFG-210ENST00000620299 1289 ntTSL 5 BASIC17.95■□□□□ 0.46
PCGF3Q3KNV8 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC17.95■□□□□ 0.46
PCGF3Q3KNV8 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PCGF3Q3KNV8 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
PCGF3Q3KNV8 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC17.94■□□□□ 0.46
PCGF3Q3KNV8 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC17.94■□□□□ 0.46
PCGF3Q3KNV8 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
PCGF3Q3KNV8 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
PCGF3Q3KNV8 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
PCGF3Q3KNV8 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC17.94■□□□□ 0.46
PCGF3Q3KNV8 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC17.94■□□□□ 0.46
PCGF3Q3KNV8 UBE2DNL-204ENST00000602536 740 ntBASIC17.94■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 47.8 ms