Protein–RNA interactions for Protein: Q03692

COL10A1, Collagen alpha-1(X) chain, humanhuman

Predictions only

Length 680 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL10A1Q03692 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
COL10A1Q03692 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
COL10A1Q03692 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
COL10A1Q03692 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC17.14■□□□□ 0.33
COL10A1Q03692 SAPCD2P1-201ENST00000395413 1184 ntBASIC17.14■□□□□ 0.33
COL10A1Q03692 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
COL10A1Q03692 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC17.14■□□□□ 0.33
COL10A1Q03692 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC17.14■□□□□ 0.33
COL10A1Q03692 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
COL10A1Q03692 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC17.14■□□□□ 0.33
COL10A1Q03692 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
COL10A1Q03692 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC17.14■□□□□ 0.33
COL10A1Q03692 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC17.14■□□□□ 0.33
COL10A1Q03692 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
COL10A1Q03692 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
COL10A1Q03692 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
COL10A1Q03692 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
COL10A1Q03692 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.33
COL10A1Q03692 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC17.14■□□□□ 0.33
COL10A1Q03692 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
COL10A1Q03692 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
COL10A1Q03692 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
COL10A1Q03692 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
COL10A1Q03692 AC007952.6-201ENST00000573168 2673 ntBASIC17.14■□□□□ 0.33
COL10A1Q03692 AC003957.1-201ENST00000625108 2673 ntBASIC17.14■□□□□ 0.33
COL10A1Q03692 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
COL10A1Q03692 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
COL10A1Q03692 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
COL10A1Q03692 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
COL10A1Q03692 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC17.13■□□□□ 0.33
COL10A1Q03692 AP005212.1-201ENST00000581547 1997 ntBASIC17.13■□□□□ 0.33
COL10A1Q03692 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
COL10A1Q03692 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC17.13■□□□□ 0.33
COL10A1Q03692 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC17.13■□□□□ 0.33
COL10A1Q03692 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC17.13■□□□□ 0.33
COL10A1Q03692 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
COL10A1Q03692 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC17.13■□□□□ 0.33
COL10A1Q03692 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
COL10A1Q03692 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
COL10A1Q03692 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
COL10A1Q03692 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
COL10A1Q03692 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC17.13■□□□□ 0.33
COL10A1Q03692 AC007322.4-201ENST00000509611 723 ntBASIC17.13■□□□□ 0.33
COL10A1Q03692 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC17.13■□□□□ 0.33
COL10A1Q03692 DUX4L16-201ENST00000555130 1264 ntBASIC17.13■□□□□ 0.33
COL10A1Q03692 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC17.13■□□□□ 0.33
COL10A1Q03692 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
COL10A1Q03692 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC17.13■□□□□ 0.33
COL10A1Q03692 MIR2861-201ENST00000636310 90 ntBASIC17.13■□□□□ 0.33
COL10A1Q03692 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
COL10A1Q03692 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC17.13■□□□□ 0.33
COL10A1Q03692 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
COL10A1Q03692 LINC01521-201ENST00000504184 1943 ntBASIC17.13■□□□□ 0.33
COL10A1Q03692 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
COL10A1Q03692 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
COL10A1Q03692 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
COL10A1Q03692 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
COL10A1Q03692 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
COL10A1Q03692 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC17.12■□□□□ 0.33
COL10A1Q03692 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC17.12■□□□□ 0.33
COL10A1Q03692 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
COL10A1Q03692 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
COL10A1Q03692 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC17.12■□□□□ 0.33
COL10A1Q03692 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC17.12■□□□□ 0.33
COL10A1Q03692 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
COL10A1Q03692 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
COL10A1Q03692 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
COL10A1Q03692 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
COL10A1Q03692 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
COL10A1Q03692 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
COL10A1Q03692 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
COL10A1Q03692 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC17.12■□□□□ 0.33
COL10A1Q03692 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC17.12■□□□□ 0.33
COL10A1Q03692 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC17.12■□□□□ 0.33
COL10A1Q03692 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC17.12■□□□□ 0.33
COL10A1Q03692 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
COL10A1Q03692 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
COL10A1Q03692 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
COL10A1Q03692 GAS2L1P2-201ENST00000436355 1356 ntBASIC17.12■□□□□ 0.33
COL10A1Q03692 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
COL10A1Q03692 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
COL10A1Q03692 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
COL10A1Q03692 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC17.12■□□□□ 0.33
COL10A1Q03692 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC17.12■□□□□ 0.33
COL10A1Q03692 GABARAPL3-202ENST00000624044 1851 ntBASIC17.12■□□□□ 0.33
COL10A1Q03692 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC17.12■□□□□ 0.33
COL10A1Q03692 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC17.11■□□□□ 0.33
COL10A1Q03692 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
COL10A1Q03692 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
COL10A1Q03692 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
COL10A1Q03692 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
COL10A1Q03692 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
COL10A1Q03692 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
COL10A1Q03692 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC17.11■□□□□ 0.33
COL10A1Q03692 CASP6-205ENST00000505486 538 ntTSL 4 BASIC17.11■□□□□ 0.33
COL10A1Q03692 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
COL10A1Q03692 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
COL10A1Q03692 FAM21FP-204ENST00000608637 956 ntBASIC17.11■□□□□ 0.33
COL10A1Q03692 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC17.11■□□□□ 0.33
COL10A1Q03692 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 11.3 ms