Protein–RNA interactions for Protein: P61011

SRP54, Signal recognition particle 54 kDa protein, humanhuman

Known RBP Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54P61011 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
SRP54P61011 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
SRP54P61011 UNC93B4-201ENST00000505679 747 ntBASIC20.09■□□□□ 0.81
SRP54P61011 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
SRP54P61011 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC20.09■□□□□ 0.81
SRP54P61011 AC008403.3-201ENST00000598924 454 ntBASIC20.09■□□□□ 0.81
SRP54P61011 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
SRP54P61011 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
SRP54P61011 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
SRP54P61011 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SRP54P61011 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
SRP54P61011 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
SRP54P61011 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SRP54P61011 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
SRP54P61011 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
SRP54P61011 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC20.08■□□□□ 0.81
SRP54P61011 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
SRP54P61011 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
SRP54P61011 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC20.08■□□□□ 0.81
SRP54P61011 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
SRP54P61011 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
SRP54P61011 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
SRP54P61011 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
SRP54P61011 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
SRP54P61011 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC20.08■□□□□ 0.81
SRP54P61011 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC20.08■□□□□ 0.81
SRP54P61011 REXO2-208ENST00000539754 791 ntTSL 2 BASIC20.08■□□□□ 0.81
SRP54P61011 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC20.08■□□□□ 0.81
SRP54P61011 AC073648.6-201ENST00000641589 218 ntBASIC20.08■□□□□ 0.81
SRP54P61011 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
SRP54P61011 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC20.08■□□□□ 0.8
SRP54P61011 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
SRP54P61011 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.8
SRP54P61011 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC20.07■□□□□ 0.8
SRP54P61011 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
SRP54P61011 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
SRP54P61011 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
SRP54P61011 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
SRP54P61011 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC20.07■□□□□ 0.8
SRP54P61011 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SRP54P61011 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SRP54P61011 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SRP54P61011 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
SRP54P61011 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SRP54P61011 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
SRP54P61011 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC20.07■□□□□ 0.8
SRP54P61011 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC20.07■□□□□ 0.8
SRP54P61011 AC098590.1-201ENST00000468126 897 ntBASIC20.07■□□□□ 0.8
SRP54P61011 OR2A1-AS1-207ENST00000486094 819 ntBASIC20.07■□□□□ 0.8
SRP54P61011 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SRP54P61011 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC20.07■□□□□ 0.8
SRP54P61011 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
SRP54P61011 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
SRP54P61011 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SRP54P61011 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC20.07■□□□□ 0.8
SRP54P61011 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
SRP54P61011 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SRP54P61011 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
SRP54P61011 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SRP54P61011 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
SRP54P61011 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
SRP54P61011 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
SRP54P61011 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC20.06■□□□□ 0.8
SRP54P61011 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SRP54P61011 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SRP54P61011 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
SRP54P61011 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC20.06■□□□□ 0.8
SRP54P61011 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC20.06■□□□□ 0.8
SRP54P61011 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
SRP54P61011 BRWD1-AS2-201ENST00000603064 1028 ntBASIC20.06■□□□□ 0.8
SRP54P61011 MMD2-204ENST00000612910 778 ntTSL 5 BASIC20.06■□□□□ 0.8
SRP54P61011 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SRP54P61011 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC20.06■□□□□ 0.8
SRP54P61011 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
SRP54P61011 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
SRP54P61011 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
SRP54P61011 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SRP54P61011 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
SRP54P61011 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
SRP54P61011 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
SRP54P61011 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC20.05■□□□□ 0.8
SRP54P61011 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
SRP54P61011 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SRP54P61011 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC20.05■□□□□ 0.8
SRP54P61011 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC20.05■□□□□ 0.8
SRP54P61011 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC20.05■□□□□ 0.8
SRP54P61011 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC20.05■□□□□ 0.8
SRP54P61011 GCSHP5-201ENST00000443090 522 ntBASIC20.05■□□□□ 0.8
SRP54P61011 RPS2P52-201ENST00000469610 820 ntBASIC20.05■□□□□ 0.8
SRP54P61011 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
SRP54P61011 SLC29A4P2-201ENST00000504749 1089 ntBASIC20.05■□□□□ 0.8
SRP54P61011 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SRP54P61011 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC20.05■□□□□ 0.8
SRP54P61011 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC20.05■□□□□ 0.8
SRP54P61011 SOX15-203ENST00000570788 1093 ntBASIC20.05■□□□□ 0.8
SRP54P61011 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
SRP54P61011 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
SRP54P61011 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SRP54P61011 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC20.05■□□□□ 0.8
SRP54P61011 AL049796.1-201ENST00000565336 1766 ntBASIC20.05■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 58 ms