Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
CDH11P55287 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC18.61■□□□□ 0.57
CDH11P55287 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
CDH11P55287 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CDH11P55287 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CDH11P55287 AP004607.4-201ENST00000530158 1459 ntBASIC18.61■□□□□ 0.57
CDH11P55287 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC18.61■□□□□ 0.57
CDH11P55287 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CDH11P55287 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CDH11P55287 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CDH11P55287 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
CDH11P55287 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CDH11P55287 DBI-210ENST00000542275 757 ntTSL 5 BASIC18.61■□□□□ 0.57
CDH11P55287 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC18.61■□□□□ 0.57
CDH11P55287 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
CDH11P55287 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CDH11P55287 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CDH11P55287 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
CDH11P55287 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CDH11P55287 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC18.6■□□□□ 0.57
CDH11P55287 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CDH11P55287 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC18.6■□□□□ 0.57
CDH11P55287 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CDH11P55287 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CDH11P55287 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
CDH11P55287 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC18.6■□□□□ 0.57
CDH11P55287 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CDH11P55287 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC18.6■□□□□ 0.57
CDH11P55287 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CDH11P55287 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CDH11P55287 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CDH11P55287 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CDH11P55287 KRT19P1-201ENST00000405746 1186 ntBASIC18.6■□□□□ 0.57
CDH11P55287 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC18.6■□□□□ 0.57
CDH11P55287 TESC-206ENST00000541210 936 ntTSL 3 BASIC18.6■□□□□ 0.57
CDH11P55287 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC18.6■□□□□ 0.57
CDH11P55287 VPS53-216ENST00000574029 585 ntTSL 4 BASIC18.6■□□□□ 0.57
CDH11P55287 CPT2-209ENST00000636935 803 ntTSL 5 BASIC18.6■□□□□ 0.57
CDH11P55287 AL512408.1-201ENST00000569378 2000 ntBASIC18.6■□□□□ 0.57
CDH11P55287 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CDH11P55287 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CDH11P55287 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC18.6■□□□□ 0.57
CDH11P55287 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
CDH11P55287 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CDH11P55287 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
CDH11P55287 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CDH11P55287 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC18.59■□□□□ 0.57
CDH11P55287 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
CDH11P55287 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC18.59■□□□□ 0.57
CDH11P55287 AC055733.4-201ENST00000638462 1354 ntBASIC18.59■□□□□ 0.57
CDH11P55287 AC112907.3-201ENST00000577781 2400 ntBASIC18.59■□□□□ 0.57
CDH11P55287 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CDH11P55287 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC18.59■□□□□ 0.57
CDH11P55287 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
CDH11P55287 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
CDH11P55287 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
CDH11P55287 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC18.59■□□□□ 0.57
CDH11P55287 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC18.59■□□□□ 0.57
CDH11P55287 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
CDH11P55287 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC18.59■□□□□ 0.57
CDH11P55287 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC18.59■□□□□ 0.57
CDH11P55287 FXN-202ENST00000396364 980 ntTSL 5 BASIC18.59■□□□□ 0.57
CDH11P55287 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC18.59■□□□□ 0.57
CDH11P55287 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC18.59■□□□□ 0.57
CDH11P55287 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CDH11P55287 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
CDH11P55287 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
CDH11P55287 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
CDH11P55287 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC18.59■□□□□ 0.57
CDH11P55287 USP39-204ENST00000409766 2033 ntTSL 2 BASIC18.59■□□□□ 0.57
CDH11P55287 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC18.59■□□□□ 0.57
CDH11P55287 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CDH11P55287 AL162377.1-201ENST00000618844 1793 ntBASIC18.58■□□□□ 0.57
CDH11P55287 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC18.58■□□□□ 0.57
CDH11P55287 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
CDH11P55287 AC005224.4-201ENST00000583262 1652 ntBASIC18.58■□□□□ 0.57
CDH11P55287 STX7-201ENST00000367937 1090 ntTSL 5 BASIC18.58■□□□□ 0.56
CDH11P55287 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
CDH11P55287 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC18.58■□□□□ 0.56
CDH11P55287 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC18.58■□□□□ 0.56
CDH11P55287 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
CDH11P55287 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CDH11P55287 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CDH11P55287 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
CDH11P55287 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CDH11P55287 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
CDH11P55287 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC18.57■□□□□ 0.56
CDH11P55287 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CDH11P55287 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CDH11P55287 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CDH11P55287 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
CDH11P55287 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC18.57■□□□□ 0.56
CDH11P55287 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC18.57■□□□□ 0.56
CDH11P55287 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CDH11P55287 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CDH11P55287 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC18.57■□□□□ 0.56
CDH11P55287 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC18.57■□□□□ 0.56
CDH11P55287 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC18.57■□□□□ 0.56
CDH11P55287 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC18.57■□□□□ 0.56
CDH11P55287 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC18.57■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms