Protein–RNA interactions for Protein: P54253

ATXN1, Ataxin-1, humanhuman

Known RBP Predictions only

Length 815 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN1P54253 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
ATXN1P54253 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
ATXN1P54253 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
ATXN1P54253 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
ATXN1P54253 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC21.37■■□□□ 1.01
ATXN1P54253 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
ATXN1P54253 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
ATXN1P54253 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
ATXN1P54253 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
ATXN1P54253 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC21.37■■□□□ 1.01
ATXN1P54253 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
ATXN1P54253 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
ATXN1P54253 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
ATXN1P54253 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
ATXN1P54253 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
ATXN1P54253 SAPCD2P1-201ENST00000395413 1184 ntBASIC21.37■■□□□ 1.01
ATXN1P54253 ESRRAP1-201ENST00000400596 1257 ntBASIC21.37■■□□□ 1.01
ATXN1P54253 ECEL1P3-201ENST00000427961 737 ntBASIC21.37■■□□□ 1.01
ATXN1P54253 AC093787.1-201ENST00000450396 207 ntBASIC21.37■■□□□ 1.01
ATXN1P54253 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
ATXN1P54253 FAM21FP-204ENST00000608637 956 ntBASIC21.37■■□□□ 1.01
ATXN1P54253 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC21.37■■□□□ 1.01
ATXN1P54253 AC092118.2-201ENST00000613495 667 ntBASIC21.37■■□□□ 1.01
ATXN1P54253 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC21.37■■□□□ 1.01
ATXN1P54253 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC21.37■■□□□ 1.01
ATXN1P54253 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
ATXN1P54253 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC21.37■■□□□ 1.01
ATXN1P54253 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
ATXN1P54253 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC21.37■■□□□ 1.01
ATXN1P54253 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC21.37■■□□□ 1.01
ATXN1P54253 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC21.37■■□□□ 1.01
ATXN1P54253 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
ATXN1P54253 AC007225.1-201ENST00000566331 1836 ntBASIC21.36■■□□□ 1.01
ATXN1P54253 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
ATXN1P54253 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC21.36■■□□□ 1.01
ATXN1P54253 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
ATXN1P54253 MAX-217ENST00000557277 728 ntTSL 3 BASIC21.36■■□□□ 1.01
ATXN1P54253 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
ATXN1P54253 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
ATXN1P54253 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
ATXN1P54253 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
ATXN1P54253 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
ATXN1P54253 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC21.36■■□□□ 1.01
ATXN1P54253 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
ATXN1P54253 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC21.36■■□□□ 1.01
ATXN1P54253 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC21.36■■□□□ 1.01
ATXN1P54253 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
ATXN1P54253 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
ATXN1P54253 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
ATXN1P54253 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC21.35■■□□□ 1.01
ATXN1P54253 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC21.35■■□□□ 1.01
ATXN1P54253 PPP1R14BP2-201ENST00000426284 444 ntBASIC21.35■■□□□ 1.01
ATXN1P54253 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC21.35■■□□□ 1.01
ATXN1P54253 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC21.35■■□□□ 1.01
ATXN1P54253 AL162412.1-201ENST00000567129 965 ntBASIC21.35■■□□□ 1.01
ATXN1P54253 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
ATXN1P54253 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC21.35■■□□□ 1.01
ATXN1P54253 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC21.35■■□□□ 1.01
ATXN1P54253 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
ATXN1P54253 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
ATXN1P54253 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
ATXN1P54253 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC21.35■■□□□ 1.01
ATXN1P54253 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC21.35■■□□□ 1.01
ATXN1P54253 BID-203ENST00000399765 1879 ntTSL 2 BASIC21.35■■□□□ 1.01
ATXN1P54253 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
ATXN1P54253 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
ATXN1P54253 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
ATXN1P54253 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
ATXN1P54253 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
ATXN1P54253 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
ATXN1P54253 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC21.34■■□□□ 1.01
ATXN1P54253 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
ATXN1P54253 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
ATXN1P54253 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC21.34■■□□□ 1.01
ATXN1P54253 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
ATXN1P54253 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
ATXN1P54253 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC21.33■■□□□ 1.01
ATXN1P54253 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1.01
ATXN1P54253 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC21.33■■□□□ 1.01
ATXN1P54253 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
ATXN1P54253 MIPEPP3-201ENST00000412105 444 ntBASIC21.33■■□□□ 1.01
ATXN1P54253 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC21.33■■□□□ 1.01
ATXN1P54253 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
ATXN1P54253 PBX1-209ENST00000485769 834 ntTSL 2 BASIC21.33■■□□□ 1.01
ATXN1P54253 UNC93B4-201ENST00000505679 747 ntBASIC21.33■■□□□ 1.01
ATXN1P54253 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC21.33■■□□□ 1.01
ATXN1P54253 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC21.33■■□□□ 1.01
ATXN1P54253 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC21.33■■□□□ 1.01
ATXN1P54253 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC21.33■■□□□ 1.01
ATXN1P54253 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
ATXN1P54253 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1
ATXN1P54253 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1
ATXN1P54253 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1
ATXN1P54253 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
ATXN1P54253 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC21.32■■□□□ 1
ATXN1P54253 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
ATXN1P54253 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC21.32■■□□□ 1
ATXN1P54253 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
ATXN1P54253 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC21.32■■□□□ 1
ATXN1P54253 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 14.5 ms