Protein–RNA interactions for Protein: P49459

UBE2A, Ubiquitin-conjugating enzyme E2 A, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2AP49459 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
UBE2AP49459 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
UBE2AP49459 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC12.88□□□□□ -0.35
UBE2AP49459 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC12.88□□□□□ -0.35
UBE2AP49459 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
UBE2AP49459 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
UBE2AP49459 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
UBE2AP49459 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
UBE2AP49459 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
UBE2AP49459 AC020763.4-201ENST00000623414 4170 ntBASIC12.87□□□□□ -0.35
UBE2AP49459 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC12.87□□□□□ -0.35
UBE2AP49459 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
UBE2AP49459 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC12.87□□□□□ -0.35
UBE2AP49459 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
UBE2AP49459 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
UBE2AP49459 AC027612.3-201ENST00000413684 1047 ntBASIC12.87□□□□□ -0.35
UBE2AP49459 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC12.87□□□□□ -0.35
UBE2AP49459 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC12.87□□□□□ -0.35
UBE2AP49459 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC12.87□□□□□ -0.35
UBE2AP49459 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC12.87□□□□□ -0.35
UBE2AP49459 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC12.87□□□□□ -0.35
UBE2AP49459 EEF1DP3-203ENST00000566025 782 ntBASIC12.87□□□□□ -0.35
UBE2AP49459 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
UBE2AP49459 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
UBE2AP49459 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC12.87□□□□□ -0.35
UBE2AP49459 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
UBE2AP49459 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
UBE2AP49459 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
UBE2AP49459 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
UBE2AP49459 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
UBE2AP49459 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
UBE2AP49459 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
UBE2AP49459 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
UBE2AP49459 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
UBE2AP49459 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
UBE2AP49459 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
UBE2AP49459 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
UBE2AP49459 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
UBE2AP49459 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
UBE2AP49459 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
UBE2AP49459 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC12.86□□□□□ -0.35
UBE2AP49459 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
UBE2AP49459 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
UBE2AP49459 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC12.86□□□□□ -0.35
UBE2AP49459 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
UBE2AP49459 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC12.86□□□□□ -0.35
UBE2AP49459 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC12.86□□□□□ -0.35
UBE2AP49459 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
UBE2AP49459 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
UBE2AP49459 AC121338.2-201ENST00000622535 1744 ntBASIC12.86□□□□□ -0.35
UBE2AP49459 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
UBE2AP49459 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
UBE2AP49459 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC12.86□□□□□ -0.35
UBE2AP49459 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC12.86□□□□□ -0.35
UBE2AP49459 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
UBE2AP49459 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC12.86□□□□□ -0.35
UBE2AP49459 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
UBE2AP49459 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC12.86□□□□□ -0.35
UBE2AP49459 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
UBE2AP49459 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
UBE2AP49459 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
UBE2AP49459 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
UBE2AP49459 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
UBE2AP49459 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
UBE2AP49459 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
UBE2AP49459 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
UBE2AP49459 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC12.86□□□□□ -0.35
UBE2AP49459 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
UBE2AP49459 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
UBE2AP49459 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
UBE2AP49459 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC12.85□□□□□ -0.35
UBE2AP49459 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
UBE2AP49459 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
UBE2AP49459 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
UBE2AP49459 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
UBE2AP49459 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
UBE2AP49459 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
UBE2AP49459 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
UBE2AP49459 SERP1-208ENST00000491660 830 ntTSL 2 BASIC12.85□□□□□ -0.35
UBE2AP49459 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC12.85□□□□□ -0.35
UBE2AP49459 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
UBE2AP49459 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC12.85□□□□□ -0.35
UBE2AP49459 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
UBE2AP49459 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
UBE2AP49459 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
UBE2AP49459 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC12.85□□□□□ -0.35
UBE2AP49459 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
UBE2AP49459 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC12.85□□□□□ -0.35
UBE2AP49459 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
UBE2AP49459 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
UBE2AP49459 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
UBE2AP49459 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
UBE2AP49459 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
UBE2AP49459 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
UBE2AP49459 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
UBE2AP49459 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC12.84□□□□□ -0.35
UBE2AP49459 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC12.84□□□□□ -0.35
UBE2AP49459 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
UBE2AP49459 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
UBE2AP49459 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms